Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M05
         (454 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FIX0 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_UPI0000D5799D Cluster: PREDICTED: similar to CG3696-PA,...    32   6.6  

>UniRef50_A2FIX0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1655

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +3

Query: 159 LNTSFYLLRVDDAKPNRLVPNCSNALSISTLKFHNGED*LPSPVRSLVVPAEL 317
           LNT   L+   DA    L+ N  + LS    KF +  D LP P   + +PAEL
Sbjct: 675 LNTILPLITNQDASNRSLLSNYVSNLSQMMTKFQSAIDSLPQPFLQVDIPAEL 727


>UniRef50_UPI0000D5799D Cluster: PREDICTED: similar to CG3696-PA,
            isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG3696-PA, isoform A - Tribolium castaneum
          Length = 4009

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +3

Query: 213  VPNCSNALSISTLKFHNGED*LPSPVRSLVVPAELG-NSADANFNKLKPRAEFGTRRASL 389
            V +C+  + +  L+F+ G++ + S +  L+ P+E G      N + LK     G R  + 
Sbjct: 2260 VEDCARVILLYCLRFYRGDEKIRSFIWDLIAPSENGEQKISRNHHGLKDPVPRGIRNKNK 2319

Query: 390  RRNLENNPK*VKEP 431
            ++  +N    + +P
Sbjct: 2320 KKGKDNRHAALTDP 2333


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,647,384
Number of Sequences: 1657284
Number of extensions: 6768795
Number of successful extensions: 13072
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13069
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)