Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M05
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   0.89 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   1.6  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   6.3  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = -1

Query: 319 PSSAGTTNDRTGDGS---QSSPLWNF 251
           PSS    +D+TG+G    Q  P W+F
Sbjct: 92  PSSLNVVSDKTGNGGRLLQPYPDWSF 117


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 225 SNALSISTLKFHNGED 272
           SN  SIS L+FHN +D
Sbjct: 252 SNKGSISKLQFHNKDD 267


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 183 RVDDAKPNRLVPNCSNALSISTLK 254
           ++D  + NRLV NC +    ++ K
Sbjct: 90  KLDSEQVNRLVNNCKDITESNSCK 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,099
Number of Sequences: 438
Number of extensions: 1861
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)