Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M03
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   9.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 393 LYKTF*YSLNMIKYNNRPNSVTMLIDN 473
           +Y++  +S+N    N+  NSVT ++++
Sbjct: 54  IYESCRFSINQPYLNHFDNSVTPMVNH 80


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 189 IKNPCIYLLCWVTSQFIVR 133
           I   C+YL  WV  +  +R
Sbjct: 9   ISEDCLYLNIWVPQRLRIR 27


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 393 LYKTF*YSLNMIKYNNRPNSVTMLIDN 473
           +Y++  +S+N    N+  NSVT ++++
Sbjct: 54  IYESCRFSINQPYLNHFDNSVTPMVNH 80


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 393 LYKTF*YSLNMIKYNNRPNSVTMLIDN 473
           +Y++  +S+N    N+  NSVT ++++
Sbjct: 54  IYESCRFSINQPYLNHFDNSVTPMVNH 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,718
Number of Sequences: 336
Number of extensions: 2257
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)