Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_M01
(429 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_42093| Best HMM Match : RVT_1 (HMM E-Value=2.5e-20) 28 2.9
SB_40417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1) 28 2.9
SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_28572| Best HMM Match : RVT_1 (HMM E-Value=2e-20) 28 2.9
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_21287| Best HMM Match : Lectin_C (HMM E-Value=3.1) 28 2.9
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12) 28 2.9
SB_8874| Best HMM Match : PhaG_MnhG_YufB (HMM E-Value=2.4) 28 2.9
SB_50382| Best HMM Match : RVT_1 (HMM E-Value=0.026) 28 2.9
SB_35242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) 28 2.9
SB_11516| Best HMM Match : Lectin_C (HMM E-Value=2.9) 28 2.9
SB_48389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_37907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_21189| Best HMM Match : PCI (HMM E-Value=8.2) 28 3.8
SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7) 27 5.0
SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_15918| Best HMM Match : Toxin_23 (HMM E-Value=2.3) 27 5.0
SB_54371| Best HMM Match : ChaB (HMM E-Value=3.9) 27 5.0
SB_28104| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_2744| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
>SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 154 YDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKYEKNVID 279
YD + K K+H+DD E Y + D +D Y+ N D
Sbjct: 636 YDDNEGSKMVKVHWDDYENYVNVNVNDDDYDDYDDYDDNDYD 677
>SB_42093| Best HMM Match : RVT_1 (HMM E-Value=2.5e-20)
Length = 325
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 219 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 255
>SB_40417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 219 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 255
>SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1)
Length = 311
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 135 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 171
>SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 533 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 569
>SB_28572| Best HMM Match : RVT_1 (HMM E-Value=2e-20)
Length = 388
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 219 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 255
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 775 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 811
>SB_21287| Best HMM Match : Lectin_C (HMM E-Value=3.1)
Length = 179
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 73 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 109
>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
Length = 769
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 663 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 699
>SB_8874| Best HMM Match : PhaG_MnhG_YufB (HMM E-Value=2.4)
Length = 252
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 168 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 204
>SB_50382| Best HMM Match : RVT_1 (HMM E-Value=0.026)
Length = 1036
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 843 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 879
>SB_35242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 135 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 171
>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 801
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 633 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 669
>SB_11516| Best HMM Match : Lectin_C (HMM E-Value=2.9)
Length = 267
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 114 VNLNVCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ + + D L+ + N+C K+ + LGLL R CS
Sbjct: 161 LGVTIADNLSWNEHCDNICKKANSTLGLLKRILSGCS 197
>SB_48389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 151 LYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKYEKNVID 279
+ + +L LKSS+L F +KE E+ ++ D Y ++D
Sbjct: 161 ILEKELLLKSSQLAFLEKELEEQQRLLEEETKEIDSYSNQLVD 203
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 137 IPTLSYTILI*N*RAPNYISTTKSATSVCLLSKL-DVIHSTNTKRTLST 280
IP++S +IL N +TT+ ATSV LLS L D I + +T T
Sbjct: 756 IPSISTSILPYNTTVIATPNTTRIATSVILLSSLNDTIRTRSTSVVFET 804
>SB_37907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 417 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQTKFYFECIHKVDNVLFVF 256
E ++ +R CQ N A W +RL +Q +I K I +++ L F
Sbjct: 9 ETTESAVRRCQRNSVMDIDAAWPKFQRLKSQFSINSKKISMNDIKRLEAALIPF 62
>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3610
Score = 27.9 bits (59), Expect = 3.8
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +1
Query: 43 IATFITQIRWISLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERM 222
+ T I QIR +S ++ I ++ +K I DT + SSKL ++ YE
Sbjct: 1651 VGTTIGQIRAVSQNNRPIMYQPLH-ENPNAKEEIGIEIDTGSIVTSSKLDYESVNNYELQ 1709
Query: 223 PFVKTGCDTFDKYEKNVIDF 282
+ K DT +N + F
Sbjct: 1710 DYQKFTIDTQRGTIRNAVVF 1729
>SB_21189| Best HMM Match : PCI (HMM E-Value=8.2)
Length = 125
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 417 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQTKFYFECIHKVDNVLFVF 256
E ++ +R CQ N A W +RL +Q +I K I +++ L F
Sbjct: 41 ETTESAVRRCQRNSVMDIDAAWPKFQRLKSQFSINSKKISMNDIKRLEAALIPF 94
>SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7)
Length = 537
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 102 VCDLLALQAYPSNLCDKSGNXLGLLTRARIHCS 4
+ D L+ + N+C K+ + LGLL R CS
Sbjct: 187 IADNLSWNEHCDNICKKANSTLGLLKRILSGCS 219
>SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 85 SKQITDIKI-YLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFV 231
S+QIT + LA +SK+P+P+L D L++ S D + P++
Sbjct: 2 SEQITCFLLPVLATPSSKFPFPVLVDAVLRMLKSMSSTSDGAIHGASPWL 51
>SB_15918| Best HMM Match : Toxin_23 (HMM E-Value=2.3)
Length = 227
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 127 TSKYPYPILYDTDLKLKSSKLH 192
T YP+P LYDT L L++ H
Sbjct: 203 TEIYPHPSLYDTQLNLQTKISH 224
>SB_54371| Best HMM Match : ChaB (HMM E-Value=3.9)
Length = 557
Score = 27.5 bits (58), Expect = 5.0
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = +1
Query: 70 WISLKSKQITDIKIYLAG-HTSKYPYPILYDTDLKLKS-SKLHFDDKERYERMPFVKTGC 243
++ +SK + IK Y +G T+K + +++K + K DD++ + +M ++
Sbjct: 391 FVGPRSKMYSYIKDYQSGAKTAKGIKKNVVKSNIKHEDYKKTLMDDRQMHHKMKTIRRQN 450
Query: 244 DTFDKYE---KNVIDFMDTLKI-KLGLSNIV-LSEKSLLD 348
T +YE K++ F D + + K G++ I L E+SL D
Sbjct: 451 HTLGRYEINKKSLSCFDDKMHMSKNGITPITHLPEESLFD 490
>SB_28104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 189 TFRRQRALRAYAFCQNWM*YIRQIRKERYRLYGYT 293
+FR Q+ A N M Y RQ+RK+ R Y T
Sbjct: 221 SFRLQKICDTQAVLDNEMTYHRQVRKKYKRAYAVT 255
>SB_2744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 317 LDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 219
LDK + L+V++ ++ Y NV+ P L KG+
Sbjct: 88 LDKGKYALNVTVPTLDKGKYALNVTVPTLDKGM 120
>SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKYEKNVID 279
+DLK +SS+L D+K R R +T F++ E +D
Sbjct: 124 SDLKTRSSRLRSDEKTRCSRRRTGRTIVLRFERVEAKYMD 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,662,316
Number of Sequences: 59808
Number of extensions: 242921
Number of successful extensions: 788
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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