Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M01
         (429 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  29   8.8  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                29   8.8  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    29   8.8  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 64    IRWISLKSKQITDIKIYLAGHTSKYPY 144
             IRWI    ++ITD+++ + G T  + Y
Sbjct: 17366 IRWIKCNKRRITDLRLRVTGLTEDHEY 17392


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 64    IRWISLKSKQITDIKIYLAGHTSKYPY 144
             IRWI    ++ITD+++ + G T  + Y
Sbjct: 24790 IRWIKCNKRRITDLRLRVTGLTEDHEY 24816


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 64    IRWISLKSKQITDIKIYLAGHTSKYPY 144
             IRWI    ++ITD+++ + G T  + Y
Sbjct: 17366 IRWIKCNKRRITDLRLRVTGLTEDHEY 17392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,502,851
Number of Sequences: 237096
Number of extensions: 1037368
Number of successful extensions: 2324
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2324
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)