Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_M01
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    38   0.004
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    38   0.004
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    38   0.004
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    31   0.65 

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
 Frame = +1

Query: 43   IATFITQIRWISLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERM 222
            IA  I  IR  SL+S+  +D+++ +        YP L  +D      K+++       ++
Sbjct: 3078 IAPAINDIRE-SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKL 3132

Query: 223  PFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHV 381
              +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K +
Sbjct: 3133 AGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI 3191

Query: 382  L 384
            +
Sbjct: 3192 I 3192


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
 Frame = +1

Query: 43   IATFITQIRWISLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERM 222
            IA  I  IR  SL+S+  +D+++ +        YP L  +D      K+++       ++
Sbjct: 801  IAPAINDIRE-SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKL 855

Query: 223  PFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHV 381
              +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K +
Sbjct: 856  AGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI 914

Query: 382  L 384
            +
Sbjct: 915  I 915


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
 Frame = +1

Query: 43   IATFITQIRWISLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERM 222
            IA  I  IR  SL+S+  +D+++ +        YP L  +D      K+++       ++
Sbjct: 3078 IAPAINDIRE-SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKL 3132

Query: 223  PFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHV 381
              +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K +
Sbjct: 3133 AGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSI 3191

Query: 382  L 384
            +
Sbjct: 3192 I 3192


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
            protein.
          Length = 4129

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -2

Query: 374  LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 219
            +TA    GR+  DF+L  +++KP+FI+    +SI  +     VS  VL  G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,603,443
Number of Sequences: 53049
Number of extensions: 328498
Number of successful extensions: 842
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)