Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L24
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0SVD7 Cluster: Glycosyl transferase, group 1 family pr...    32   7.8  
UniRef50_A3DD91 Cluster: Peptidase M50; n=1; Clostridium thermoc...    32   7.8  
UniRef50_Q0U680 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   7.8  

>UniRef50_Q0SVD7 Cluster: Glycosyl transferase, group 1 family
           protein; n=1; Clostridium perfringens SM101|Rep:
           Glycosyl transferase, group 1 family protein -
           Clostridium perfringens (strain SM101 / Type A)
          Length = 365

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +2

Query: 350 YNY*NI*INFVGFKDVKFYNVIRSRCHK*YHLLFRTEFINDLYKTTKTMNEAVKQLE 520
           Y+Y +I ++ V  KD KF+NVI+S+ +   ++       ND  K  K++ +  K +E
Sbjct: 26  YDYSDINMHLVALKDTKFFNVIKSKNNNQNYMFIE----NDKKKILKSLFKVKKYIE 78


>UniRef50_A3DD91 Cluster: Peptidase M50; n=1; Clostridium
           thermocellum ATCC 27405|Rep: Peptidase M50 - Clostridium
           thermocellum (strain ATCC 27405 / DSM 1237)
          Length = 223

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -3

Query: 439 ILFMAPTSYYIIKFYILEANKINLYILVIITTLFSILKNKELS 311
           +LF  P +Y  +K+Y LE N +N  ++V    L+  + N  L+
Sbjct: 106 VLFAVPFAYVTLKYYPLENNPLNPAVIVYNFALYGFVMNISLA 148


>UniRef50_Q0U680 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 469

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 555 IRLSISKTAEPNSSCFTASFIVLVVLYKSFINSV 454
           I++S S+T E  SSC  A+  + VVL+ + INSV
Sbjct: 230 IKMSSSETTEIISSCANANLAIDVVLHSALINSV 263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,640,169
Number of Sequences: 1657284
Number of extensions: 8648426
Number of successful extensions: 18340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18335
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)