Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L24
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.39 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.39 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   6.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   6.3  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   6.3  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   6.3  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 72  LVWYIDQKCYWNSDTVQHARSFILLKLL 155
           L W++DQ   ++ +  Q AR+F L++ L
Sbjct: 41  LFWHVDQPTVYHPELYQKARTFNLVENL 68


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 72  LVWYIDQKCYWNSDTVQHARSFILLKLL 155
           L W++DQ   ++ +  Q AR+F L++ L
Sbjct: 41  LFWHVDQPTVYHPELYQKARTFNLVENL 68


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 439 ILFMAPTSYYIIKFYI 392
           +LF    SYY+I+ YI
Sbjct: 235 LLFKREFSYYLIQIYI 250


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 439 ILFMAPTSYYIIKFYI 392
           +LF    SYY+I+ YI
Sbjct: 235 LLFKREFSYYLIQIYI 250


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 420 LLITL*NFTSLKPTK 376
           LLIT+  F +LKP K
Sbjct: 8   LLITIVTFVALKPVK 22


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 48  PDGLWICGLVWYI 86
           P  +W CG++ YI
Sbjct: 92  PVDIWACGVILYI 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,836
Number of Sequences: 438
Number of extensions: 2666
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)