Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L23
         (536 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   2.8  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    24   3.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   4.9  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   4.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 231  IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGV 335
            I  V N N  + +  I  + QKY W+  D EF GV
Sbjct: 915  ITKVRNEN-KDGYDRISGMEQKYPWIPEDKEFFGV 948


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 362  PELSNWPSHNSWELRVHCNPVIF 294
            P  S W   + W+ ++H N  +F
Sbjct: 1557 PRKSAWAMESGWDNKIHSNGSVF 1579



 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 307  LQWTRSSQELWLGQL 351
            L+W   S+ LWLG +
Sbjct: 2754 LEWNWKSKSLWLGMI 2768


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 374 VCCGPELSNWPSHNSW 327
           V CG +L+N+P  N+W
Sbjct: 171 VHCGLDLTNYPRLNAW 186


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 237 DVWNHNLHEEFQIIRQVVQKYHWVAMDTEFP 329
           D + H L+E+ Q++     +Y  ++MDT  P
Sbjct: 8   DSYRHELYEQQQLLGTSPIQYTVLSMDTPSP 38


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = +1

Query: 109 RKTRRLKKPKNLPIPEQRIVIRCQ 180
           ++ ++ KK ++LP PE  ++ +C+
Sbjct: 156 KQPKKKKKKRSLPKPEAVVIEKCE 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,853
Number of Sequences: 2352
Number of extensions: 14571
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)