Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L23
(536 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 173 3e-43
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 173 3e-43
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 173 3e-43
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 173 3e-43
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 173 3e-43
L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1 pro... 161 1e-39
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 159 4e-39
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 159 6e-39
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 159 6e-39
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 159 6e-39
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 159 6e-39
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 147 2e-35
BC064574-1|AAH64574.1| 851|Homo sapiens LOC150763 protein protein. 33 0.85
AK131197-1|BAD18392.1| 616|Homo sapiens 5). protein. 33 0.85
AK122580-1|BAC56921.1| 233|Homo sapiens FLJ00202 protein protein. 33 0.85
BC028074-1|AAH28074.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AY055015-2|AAL14717.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AY055004-1|AAL14715.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AL591049-4|CAI14242.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AL591049-2|CAI14240.1| 436|Homo sapiens stromal membrane-associ... 31 2.6
AL354943-6|CAI12311.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AL354943-4|CAI12310.1| 436|Homo sapiens stromal membrane-associ... 31 2.6
AL121961-5|CAI42147.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AL121961-3|CAI42146.1| 436|Homo sapiens stromal membrane-associ... 31 2.6
AK222711-1|BAD96431.1| 440|Homo sapiens stromal membrane-associ... 31 2.6
AK023221-1|BAB14473.1| 437|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF442495-1|AAP97320.1| 440|Homo sapiens putative protein protein. 31 2.6
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 173 bits (422), Expect = 3e-43
Identities = 80/102 (78%), Positives = 90/102 (88%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS A YQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSI 113
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 173 bits (422), Expect = 3e-43
Identities = 80/102 (78%), Positives = 90/102 (88%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS A YQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSI 113
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 173 bits (422), Expect = 3e-43
Identities = 80/102 (78%), Positives = 90/102 (88%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS A YQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSI 113
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 173 bits (422), Expect = 3e-43
Identities = 80/102 (78%), Positives = 90/102 (88%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS A YQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSI 113
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 173 bits (422), Expect = 3e-43
Identities = 80/102 (78%), Positives = 90/102 (88%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IRQV++KY++VAMDTEFPGVVARPIGEFRS A YQYQLLRCNVDL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTFM+E G+ PPG +TWQFNFKFNL EDMYAQDSI
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSI 113
>L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1
protein.
Length = 262
Score = 161 bits (392), Expect = 1e-39
Identities = 73/87 (83%), Positives = 81/87 (93%)
Frame = +3
Query: 276 IRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDLLRIIQLGLTFMDENG 455
IRQV++KY++VAMDTEFPGVVARPIGEFRS A YQYQLLRCNVDLL+IIQLGLTFM+E G
Sbjct: 4 IRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQG 63
Query: 456 KTPPGYTTWQFNFKFNLQEDMYAQDSI 536
+ PPG +TWQFNFKFNL EDMYAQDSI
Sbjct: 64 EYPPGTSTWQFNFKFNLTEDMYAQDSI 90
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 159 bits (387), Expect = 4e-39
Identities = 72/102 (70%), Positives = 83/102 (81%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ YQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVPSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSI 113
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 159 bits (386), Expect = 6e-39
Identities = 72/102 (70%), Positives = 83/102 (81%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ YQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSI 113
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 159 bits (386), Expect = 6e-39
Identities = 72/102 (70%), Positives = 83/102 (81%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ YQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSI 113
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 159 bits (386), Expect = 6e-39
Identities = 72/102 (70%), Positives = 83/102 (81%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ YQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSI 113
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 159 bits (386), Expect = 6e-39
Identities = 72/102 (70%), Positives = 83/102 (81%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ YQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTF +E G+ P G TWQFNFKFNL EDMY+QDSI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSI 113
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 147 bits (357), Expect = 2e-35
Identities = 68/102 (66%), Positives = 79/102 (77%)
Frame = +3
Query: 231 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDL 410
I +VW NL EE + IR++V Y ++AMDTEFPGVV RPIGEFRS+ YQYQLLRCNVDL
Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query: 411 LRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
L+IIQLGLTF +E G+ P G TWQFN K L DMY+QDSI
Sbjct: 72 LKIIQLGLTFTNEKGEYPSGINTWQFNCKLYLTVDMYSQDSI 113
>BC064574-1|AAH64574.1| 851|Homo sapiens LOC150763 protein protein.
Length = 851
Score = 32.7 bits (71), Expect = 0.85
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 258 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDLLRIIQLGLT 437
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 471 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 530
Query: 438 FMDENGKTPPGYT 476
+ + G PG T
Sbjct: 531 VVPQPG---PGLT 540
>AK131197-1|BAD18392.1| 616|Homo sapiens 5). protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.85
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 258 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDLLRIIQLGLT 437
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 289 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 348
Query: 438 FMDENGKTPPGYT 476
+ + G PG T
Sbjct: 349 VVPQPG---PGLT 358
>AK122580-1|BAC56921.1| 233|Homo sapiens FLJ00202 protein protein.
Length = 233
Score = 32.7 bits (71), Expect = 0.85
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 258 HEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDLLRIIQLGLT 437
H++ + Q++ ++ W+ + G G+ RS + LLR +V LLRI Q L
Sbjct: 48 HQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLL 107
Query: 438 FMDENGKTPPGYT 476
+ + G PG T
Sbjct: 108 VVPQPG---PGLT 117
>BC028074-1|AAH28074.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AY055015-2|AAL14717.1| 440|Homo sapiens stromal
membrane-associated protein SMAP1B protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AY055004-1|AAL14715.1| 440|Homo sapiens stromal
membrane-associated protein SMAP1B protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AL591049-4|CAI14242.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AL591049-2|CAI14240.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AL354943-6|CAI12311.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AL354943-4|CAI12310.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AL121961-5|CAI42147.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AL121961-3|CAI42146.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AK222711-1|BAD96431.1| 440|Homo sapiens stromal
membrane-associated protein variant protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AK023221-1|BAB14473.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ13159 fis, clone NT2RP3003555, weakly similar to
HYPOTHETICAL 32.6 KD PROTEIN IN MET30-PIG2 INTERGENIC
REGION. ).
Length = 437
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
>AF442495-1|AAP97320.1| 440|Homo sapiens putative protein protein.
Length = 440
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 ERNKYFDLEALALISLEFDKIKRKTRRLKKPKN--LPIPEQRIVIRCQQ 183
E+ KY+D A+A+ + E +K K + +R K+P+ P+ +++ + QQ
Sbjct: 124 EKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,308,230
Number of Sequences: 237096
Number of extensions: 2008212
Number of successful extensions: 4568
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4568
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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