Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L23
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21854-1|AAA87454.1| 310|Caenorhabditis elegans cCAF1 protein p... 114 3e-26
AL132860-28|CAB60501.1| 310|Caenorhabditis elegans Hypothetical... 114 3e-26
Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine r... 31 0.69
AF068709-12|AAO26013.1| 304|Caenorhabditis elegans Serpentine r... 31 0.69
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.2
U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 3.7
AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical ... 28 3.7
U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical pr... 28 4.9
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 6.5
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 27 6.5
AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal daue... 27 8.6
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 27 8.6
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 27 8.6
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 27 8.6
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 27 8.6
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 27 8.6
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 27 8.6
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 27 8.6
>U21854-1|AAA87454.1| 310|Caenorhabditis elegans cCAF1 protein
protein.
Length = 310
Score = 114 bits (275), Expect = 3e-26
Identities = 50/108 (46%), Positives = 73/108 (67%)
Frame = +3
Query: 213 GNTDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLL 392
G + I +V+ N+ EEF IR V+ Y +VAMDTEFPGVVA P+G FRS + YQ +
Sbjct: 17 GAPEVKIHNVYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATPLGTFRSKEDFNYQQV 76
Query: 393 RCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
CNV++L++IQ+G +++ G+ PP WQFNF F+ EDM++ +S+
Sbjct: 77 FCNVNMLKLIQVGFAMVNDKGELPPTGDVWQFNFNFSFAEDMFSHESV 124
>AL132860-28|CAB60501.1| 310|Caenorhabditis elegans Hypothetical
protein Y56A3A.20 protein.
Length = 310
Score = 114 bits (275), Expect = 3e-26
Identities = 50/108 (46%), Positives = 73/108 (67%)
Frame = +3
Query: 213 GNTDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTAHYQYQLL 392
G + I +V+ N+ EEF IR V+ Y +VAMDTEFPGVVA P+G FRS + YQ +
Sbjct: 17 GAPEVKIHNVYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATPLGTFRSKEDFNYQQV 76
Query: 393 RCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSI 536
CNV++L++IQ+G +++ G+ PP WQFNF F+ EDM++ +S+
Sbjct: 77 FCNVNMLKLIQVGFAMVNDKGELPPTGDVWQFNFNFSFAEDMFSHESV 124
>Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical
protein K10C8.1 protein.
Length = 566
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 303 WVAMDTEFPGVVARPIGEFRSTAHYQYQLLRCNVDLLRIIQLGLTFMDE 449
+VA+D EF G+ I T +YQ+LR NV R QLGLT +
Sbjct: 25 FVAIDFEFLGLDVSAIS-LHDTVESRYQILRDNVIKYRPCQLGLTLFKQ 72
>AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 56 protein.
Length = 321
Score = 30.7 bits (66), Expect = 0.69
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -2
Query: 238 SFIPQSVFPGNCDIEVKLAAGIL*RFSAPVWADSSVFLDAVFSVLFY 98
S++P+ ++ IEV + G L +F P D ++ + A+F+++++
Sbjct: 158 SYLPRFLWASKFTIEVNIVNGTLTKFRYPDVMDQAINVTAIFNLIYF 204
>AF068709-12|AAO26013.1| 304|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 57 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = -2
Query: 238 SFIPQSVFPGNCDIEVKLAAGIL*RFSAPVWADSSVFLDAVFSVLFY 98
S++P+ ++ +EVK+ G L +F P D ++ + AV +V+++
Sbjct: 156 SYLPRFLWASKFTVEVKIINGTLTKFRYPDVMDQAINVTAVLNVVYF 202
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 225 CGIKDVWNHNLHEEFQIIRQVVQKYH 302
CG ++ H HEEF +VV KYH
Sbjct: 330 CGAQNEHEHTHHEEFSKTDKVVNKYH 355
>U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical
protein F19C7.3 protein.
Length = 310
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 222 DCGIKDVWNHNLHEEFQIIRQVVQKYHWV 308
DC + +W H LH Q+I Q + YHW+
Sbjct: 202 DCKVIKLWRHQLHP--QLINQFI--YHWM 226
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 240 VWNHNLHEEFQIIRQVVQKYHWVAMD 317
+W N+HEE +++RQ ++ H + D
Sbjct: 2169 MWQSNVHEELKLLRQDIEARHAMLKD 2194
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 240 VWNHNLHEEFQIIRQVVQKYHWVAMD 317
+W N+HEE +++RQ ++ H + D
Sbjct: 2169 MWQSNVHEELKLLRQDIEARHAMLKD 2194
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 240 VWNHNLHEEFQIIRQVVQKYHWVAMD 317
+W N+HEE +++RQ ++ H + D
Sbjct: 2169 MWQSNVHEELKLLRQDIEARHAMLKD 2194
>AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 281 TGGAKIS-LGCNGHGVP---RSCGSANWRVQVHSTLPVPATSMQCRPFADYPV 427
TGG+ S GC + +P ++ G+ + ++T P P+ +C YP+
Sbjct: 167 TGGSYESQFGCKPYSIPPCGKTVGNVTYPACTNTTSPTPSCEKKCTSRIGYPI 219
>U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical
protein R07E4.1b protein.
Length = 986
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 520 YISSCKLNLKLNCHVV*PGGVLPFSSINVKPNWIIRKRSTLHRSSWYW*CAVDLNSP 350
Y+ KL+ LN V VLP ++ P +R L R W W ++D+N P
Sbjct: 507 YVGYLKLHSSLNSIRVVVPDVLP----SMLPFTRVRDNPHLTREEWEWIKSIDMNEP 559
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 520 YISSCKLNLKLNCHVV*PGGVLPFSSINVKPNWIIRKRSTLHRSSWYW*CAVDLNSP 350
Y+ KL+ LN V VLP ++ P +R L R W W ++D+N P
Sbjct: 643 YVGYLKLHSSLNSIRVVVPDVLP----SMLPFTRVRDNPHLTREEWEWIKSIDMNEP 695
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TGGAKISLGCNGHGVPRSCGSAN-WRVQVHSTLPVPATSMQCRPFADYP 424
+G ++ NGHGVP+ + W T +P + + + DYP
Sbjct: 157 SGNDRVLFHYNGHGVPKPTDNGEIWVFNKSFTQYIPLSIFDLQGWLDYP 205
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TGGAKISLGCNGHGVPRSCGSAN-WRVQVHSTLPVPATSMQCRPFADYP 424
+G ++ NGHGVP+ + W T +P + + + DYP
Sbjct: 157 SGNDRVLFHYNGHGVPKPTDNGEIWVFNKSFTQYIPLSIFDLQGWLDYP 205
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TGGAKISLGCNGHGVPRSCGSAN-WRVQVHSTLPVPATSMQCRPFADYP 424
+G ++ NGHGVP+ + W T +P + + + DYP
Sbjct: 157 SGNDRVLFHYNGHGVPKPTDNGEIWVFNKSFTQYIPLSIFDLQGWLDYP 205
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TGGAKISLGCNGHGVPRSCGSAN-WRVQVHSTLPVPATSMQCRPFADYP 424
+G ++ NGHGVP+ + W T +P + + + DYP
Sbjct: 157 SGNDRVLFHYNGHGVPKPTDNGEIWVFNKSFTQYIPLSIFDLQGWLDYP 205
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TGGAKISLGCNGHGVPRSCGSAN-WRVQVHSTLPVPATSMQCRPFADYP 424
+G ++ NGHGVP+ + W T +P + + + DYP
Sbjct: 181 SGNDRVLFHYNGHGVPKPTDNGEIWVFNKSFTQYIPLSIFDLQGWLDYP 229
>AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform e protein.
Length = 303
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 33 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 87
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 260 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 314
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 238 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 292
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 240 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 294
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 240 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 294
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 260 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 314
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 238 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 292
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 102 NKTENTASKKTEESAHTGAENRYKMPAANFTSISQLPGNTDCGIKDVWNHNLHEE 266
+ T T +K E + GA+ R K A + S L GN+ G +H+L+++
Sbjct: 240 SNTIETTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDD 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,500,181
Number of Sequences: 27780
Number of extensions: 307272
Number of successful extensions: 716
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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