Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L22
         (518 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3A0 Cluster: Cation-transporting ATPase; n=3; Plasmo...    32   6.8  
UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    32   9.0  
UniRef50_Q25825 Cluster: ORF105 protein; n=1; Plasmodium falcipa...    32   9.0  

>UniRef50_Q8I3A0 Cluster: Cation-transporting ATPase; n=3;
            Plasmodium|Rep: Cation-transporting ATPase - Plasmodium
            falciparum (isolate 3D7)
          Length = 2563

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -1

Query: 197  FIMIYLKLNNILFKQKSLN**HKNIIN-DTYIEVQSRFAHSKAFFYFLLLILKCLVFNL 24
            F+ IY   + +L   K+L     N+IN +  I + S F+    +FY LLL+L CL+F++
Sbjct: 1526 FVYIYYGFSFVLNGYKNLK---NNMINMNVLISISSSFS----YFYSLLLLLFCLIFSI 1577


>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
           n=2; cellular organisms|Rep: Putative uncharacterized
           protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +1

Query: 103 SMYVSFIIFLCY*FNDFCLNNI--LFNFRYIIMKNI 204
           S+Y  F++F  + F DF + N+  L+ F+Y I++ +
Sbjct: 8   SLYFFFVLFYLFYFEDFSIKNVINLYEFKYYIVRTL 43


>UniRef50_Q25825 Cluster: ORF105 protein; n=1; Plasmodium
           falciparum|Rep: ORF105 protein - Plasmodium falciparum
          Length = 121

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = -1

Query: 191 MIYLKLNNILFKQKSLN**HKNIINDTYIEVQSRFAHSKAFFYFLLLILKCLVFNLL 21
           ++Y+KL NIL K K+ N    NIIN+ Y  ++  +  S    Y LLL     ++N+L
Sbjct: 46  IVYIKLFNILLKSKNSNNYIYNIINNKYKNIKLLYILSNN-KYNLLLFKNINLWNVL 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,443,839
Number of Sequences: 1657284
Number of extensions: 4265988
Number of successful extensions: 12070
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12063
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)