Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L22
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.93 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.93 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.93 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.93 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   5.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 104 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LL 9
           +++     S+ F Y  + + KCL+F  ++LF LL
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILL 319


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 104 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LL 9
           +++     S+ F Y  + + KCL+F  ++LF LL
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILL 319


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 104 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LL 9
           +++     S+ F Y  + + KCL+F  ++LF LL
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILL 319


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 104 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LL 9
           +++     S+ F Y  + + KCL+F  ++LF LL
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILL 319


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 356 FFFFAIYLSFLAFTI 312
           FFFFAI   F+A  +
Sbjct: 75  FFFFAICCDFIALIV 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,757
Number of Sequences: 336
Number of extensions: 1631
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)