Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L21
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    26   0.30 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    25   0.70 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   6.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.6  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 52  VLEIPNIKIKKPTWLQAPSAMXKHL 126
           ++EIPN+ +   T+  +P+ + KHL
Sbjct: 359 MMEIPNVTLPTSTYSGSPTELPKHL 383


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 348 NPSTPKLNRILLISVAFLCILVSFFTTWIFMRMK 449
           NPS   L  +L I   FL +L +    WIF   K
Sbjct: 44  NPSLHYLLALLYILFTFLALLGNGLVIWIFCAAK 77


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 37  AIPFTVLEIPNIKIKKPTWL-QAPSAMXKHLHWFYYHTF 150
           A PF  +E P+I +   TWL    SA+   ++ FY   F
Sbjct: 328 ATPFVPVEPPDILMPALTWLGWINSAINPFIYAFYSADF 366


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 192  PSVGSTTDEHGHSRPVAFMPNRVNGQY 272
            P VG  T+   HSR  +    R NG+Y
Sbjct: 1761 PPVGHPTNASAHSRSGSQSMPRQNGRY 1787


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 281 FHYILTVNTIRHKCYRSTMAMFIGRRPNTR 192
           F Y + +N   +   + T+ +FIG + + R
Sbjct: 483 FSYTIVINNRNNTSMKGTVRIFIGPKEDER 512


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +3

Query: 87  NMVTGSFCNXQTFALVLLSYFLVTGGIIYDVIVEPPSVGSTTDE 218
           N   G     Q  ALV+     +  G+I  +I+     GS ++E
Sbjct: 391 NRTAGQQAAYQLLALVITLGIAIVSGLITGLIMRVLICGSISEE 434


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 560 KYKNIYLIYWNIYQ 519
           + KNIY ++W++ Q
Sbjct: 34  RQKNIYELFWHVDQ 47


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 560 KYKNIYLIYWNIYQ 519
           + KNIY ++W++ Q
Sbjct: 34  RQKNIYELFWHVDQ 47


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 259 TRFGINATGLLWPCSSVVD 203
           T FGI +T  +  CSS+++
Sbjct: 382 TGFGIQSTDFVGDCSSLLN 400


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 235 GLLWPCSSVVDPTLGGSTI 179
           GLL P  ++++PT G + I
Sbjct: 93  GLLKPGCTIIEPTSGNTGI 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,164
Number of Sequences: 438
Number of extensions: 3582
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)