Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L19
         (440 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    27   0.39 
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    27   0.39 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   3.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   8.4  

>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 26.6 bits (56), Expect = 0.39
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +3

Query: 201 LSERNCIEIVTKLIEQKLLDVIFTTDGKEYLTSQQLIREIKDELFVHGGRINTV 362
           L E  CI      ++Q  +D+I       +   QQ+ RE  D   V GG  +T+
Sbjct: 215 LDEVQCINQEATALKQLGVDIIVVLSHCGFTIDQQIARECPDVDVVVGGHSHTL 268


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 26.6 bits (56), Expect = 0.39
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +3

Query: 201 LSERNCIEIVTKLIEQKLLDVIFTTDGKEYLTSQQLIREIKDELFVHGGRINTV 362
           L E  CI      ++Q  +D+I       +   QQ+ RE  D   V GG  +T+
Sbjct: 215 LDEVQCINQEATALKQLGVDIIVVLSHCGFTIDQQIARECPDVDVVVGGHSHTL 268


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +3

Query: 180 LSSTSQRLSERNCI--EIVTKLIEQ 248
           L +T QRL E+NC   E   KL+EQ
Sbjct: 120 LRATIQRLEEQNCAMKEQNAKLLEQ 144


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 160 PTFKRRSLVLLPK 198
           P +KR+ LVLLPK
Sbjct: 542 PQWKRQRLVLLPK 554


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,176
Number of Sequences: 2352
Number of extensions: 6403
Number of successful extensions: 58
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)