Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L18
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1220 + 35021495-35021647,35022819-35022905,35022988-35023086 83 2e-16
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 38 0.005
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 36 0.028
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 33 0.15
09_06_0346 + 22435164-22435491,22435990-22436114,22436402-224365... 33 0.20
01_07_0105 - 41104655-41104851,41105818-41107150 33 0.20
02_02_0335 + 9063749-9064216,9064846-9064890,9065351-9065470,906... 33 0.26
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 32 0.34
11_01_0347 + 2601170-2602019,2602245-2603353 30 1.8
04_03_0397 - 15362353-15363383,15385301-15385910,15386890-153870... 30 1.8
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 29 2.4
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394... 29 2.4
06_01_0641 - 4652380-4653771,4653850-4654521,4654536-4654707,465... 29 3.2
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 29 3.2
09_02_0170 - 5273607-5273929,5274272-5274350,5274627-5274629 29 4.2
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 28 7.4
02_01_0020 - 127572-127637,127760-127819,127903-128004,128099-12... 28 7.4
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 27 9.7
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 27 9.7
04_03_0840 - 20224333-20224403,20224782-20225046 27 9.7
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 27 9.7
>02_05_1220 + 35021495-35021647,35022819-35022905,35022988-35023086
Length = 112
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +3
Query: 12 IRQIKIKTGVVKRITKEKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVP 191
+R +KIKT KRI KE YEKE E++ + +K++G D +++++QE VL ES MMVP
Sbjct: 4 LRNLKIKTSTCKRIVKELRSYEKEVEKEAAKTADMKEKGADPYDLKQQENVLAESRMMVP 63
Query: 192 DCQRRLAKAFTDLK-NILETEQNLKEHEDYIAAEQVLKEAE 311
DC +RL A DLK + E +++ ++ + AE + E E
Sbjct: 64 DCHKRLETALADLKATLAELKESNEQGAEIGEAESTITEVE 104
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 RGRIRQIKIKTGVVKRITKEKIVYEKEAEQQK--NRIQKIKDEGQDEHNIRKQEEVLQES 176
R R Q K G V R T+E + +KE E+ + NR ++ K +GQD N + + V +
Sbjct: 298 RNRALQEKHARGYVARKTREVRIKDKENERMRRLNRNKENKSKGQDNMNKKSSQAVFPQH 357
Query: 177 LMMVPDCQRRLAKAFTDLKNILETEQNLKEH--EDYIAAEQVLKEAEPQLP 323
+ Q+R K L++ E+ + ++H EQ+L PQ P
Sbjct: 358 TVTTNTVQKRAEKIIPSLQH-GESGNSSQQHLSSKQTPTEQLLHYL-PQFP 406
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 35.9 bits (79), Expect = 0.028
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +3
Query: 21 IKIKTGVVKRITKEKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVPDCQ 200
IK K +V R+TKEK K E++++ I +K E +D N+ K E+ ++ M D +
Sbjct: 489 IKEKDDIVFRLTKEKEEIIKLLEEKEDIIILMK-EKEDMVNLGKGED--EDRKQMADDNK 545
Query: 201 RRLAKAFTDL--KNILETEQNLKEHEDYIAAEQVLKEAE 311
RL K D+ + E E+ +KE +D + ++ KE E
Sbjct: 546 DRLIKEKDDIVVRLTKEKEEIIKEKDDIVV--RLTKEKE 582
Score = 31.1 bits (67), Expect = 0.79
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Frame = +3
Query: 15 RQIKIKTGVVKRITKEK--IVYEKE-----AEQQKNRIQKIKDEGQDEHNIRKQEEVLQE 173
R IK K +V R+TKEK I+ EK+ ++K I K+ +E +D ++ KQ+E +
Sbjct: 547 RLIKEKDDIVVRLTKEKEEIIKEKDDIVVRLTKEKEEIIKLLEEKEDIISLMKQKEDMFM 606
Query: 174 SLMMVPDCQ--RRLA--KAFTDLKNILETEQNLKEHED 275
S+ + +++A A +K+ E + +KE ED
Sbjct: 607 SIKEKENKAELKKIADEDAARSIKDKAEIMRLMKEKED 644
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/80 (28%), Positives = 43/80 (53%)
Frame = +3
Query: 12 IRQIKIKTGVVKRITKEKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVP 191
+R +K K G++ T + ++ ++ K RI K KD+ D ++++EE+++ L+
Sbjct: 337 VRLLKEKEGMINLKTVKAEETQRIEDEDKYRIIKEKDDALD-RLVKEKEEMIR--LLKEK 393
Query: 192 DCQRRLAKAFTDLKNILETE 251
D RL K DL N+ + E
Sbjct: 394 DDVVRLMKEKEDLLNLEKGE 413
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/67 (25%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 39 VVKRITKEKIVYE-KEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMM-VPDCQRRLA 212
+V++++++K+ + K+ E+ K ++ +++E +DE ++RK E L L + + +
Sbjct: 280 LVRQVSEDKMTQKSKDQEKVKAALRSLQEEIEDERHLRKHSESLHRKLKKELSEMKSAFV 339
Query: 213 KAFTDLK 233
KA DL+
Sbjct: 340 KAVKDLE 346
>09_06_0346 +
22435164-22435491,22435990-22436114,22436402-22436514,
22436919-22437023,22437147-22437531,22437645-22437776,
22437980-22438450,22438550-22439278,22439579-22439767
Length = 858
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 KIKTGVVKRITKEKIVYEKEAEQQKNRIQKIKDEGQD-EHNIRKQEEVLQESLMMVPDCQ 200
K K V +R+T+EK+ EKE Q N +QK ++ + E + +++E + + Q
Sbjct: 406 KEKIAVEERLTREKVSLEKEHLQIYNELQKANEQIMELERKLMHANSLMEELQTVQGELQ 465
Query: 201 RRLAKAFTDLKNILETEQN 257
R+ A + + + + N
Sbjct: 466 RQKDNAVKEAEKMSQINCN 484
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 60 EKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLAK---AFTDL 230
+KIV EK+ E+ KN+ + + D+ + E I + + ++ +V + K TD
Sbjct: 127 KKIVEEKKKEEAKNKQEAVTDDKKKEKVIPTKVAIDEKKEDVVVPMKEEFVKEKEKITDA 186
Query: 231 KNILETEQNLKEHEDYIAAEQ 293
KN + + +N+ ++ I AE+
Sbjct: 187 KNDVASTENVAAVDEKIKAEE 207
>02_02_0335 +
9063749-9064216,9064846-9064890,9065351-9065470,
9066025-9067527
Length = 711
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +3
Query: 39 VVKRITKEKIVYE-KEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESL-MMVPDCQRRLA 212
+V++++++K+V + K+ E+ I ++DE +DE +R+ E L + + +
Sbjct: 296 LVRQLSEDKLVRKNKDKEKIAADIHSLQDELEDERRLRRHSEDLHRKFGKELSEIKSAFV 355
Query: 213 KAFTDLKNILETEQNLKEHEDYIA 284
KA DL+ +T+ L++ D A
Sbjct: 356 KAVKDLEKEKKTKNLLEDLCDQFA 379
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 TKEKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLAKAFTDLK 233
T ++ Y+K + D+ + HN++ + LQ+SL M D ++LA + +
Sbjct: 575 TSLELDYKKATSDDNIAFSMLHDKKKKLHNLQDEITGLQQSLEMKKDEMQKLAHQVAEHE 634
Query: 234 NILETE--QNLKEHEDYIAAEQVLKEAEPQL 320
++ + + L+ E EQ L E + QL
Sbjct: 635 SVFQKSLMERLRIKEVMKGYEQTLAEVKVQL 665
>11_01_0347 + 2601170-2602019,2602245-2603353
Length = 652
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +3
Query: 123 EGQDEHNIRKQEEVLQESLMMVPDCQRRLAKAFTDLKNILETEQNLKEHEDYIAAEQVLK 302
EG ++ ++ QE+V+Q+ LM ++K ++ + + NL + ED++ +++ +
Sbjct: 549 EGVEDKLLKIQEQVIQDQLMGGKKVAVEVSKNVKEMSEEDKEKVNLGDSEDFLDSQESVD 608
Query: 303 EAEPQLPEIIT 335
Q+ +IT
Sbjct: 609 SFARQVGVLIT 619
>04_03_0397 -
15362353-15363383,15385301-15385910,15386890-15387096,
15388287-15388313,15388397-15388471
Length = 649
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +3
Query: 48 RITKEKIVYEKEAEQ-QKNRIQKIKDEGQDE-HNIRKQEEVLQESLMMVPDCQRRLAKAF 221
R+ +I EK+ E+ ++ R+QK +EG++ NIR + L M PD ++RL +
Sbjct: 208 RMDLRQIEEEKKKEEVERGRLQKELEEGRESLRNIRLK-------LDMPPDQRKRLIRRD 260
Query: 222 TDLKNILETEQNLKEHEDYIAAEQVL--KEAEPQLP 323
+++ E E+ L+E + Q L +E E QLP
Sbjct: 261 LRVEH-QEIERQLQEMQQLERERQQLEQQEIERQLP 295
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 153 QEEVLQESLMMVPDCQRRLAKAFTDLKNILETEQNLKEHEDYIA--AEQVLKEA 308
+EE L + + +CQ L+K +L+ I E + L++ D + AE+ L +A
Sbjct: 1552 EEEALASAQEEIKECQESLSKCEEELRRIQEKKMELQKEVDRLTELAERALLDA 1605
>01_01_0538 -
3938389-3939727,3939828-3940203,3940299-3940516,
3940607-3940769,3940866-3941100,3941186-3941353
Length = 832
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 75 EKEAEQQKNRIQKIKDEGQDEH-NIRKQEEVLQESLMMVPDCQRRLAKAFTDLKNILETE 251
+ E + +N ++K + ++E I+ E +L + V C RRLA+A ++ K +LE
Sbjct: 322 QAELTELENEATELKQKNEEERVAIQDMEALLIKRRRRVEKC-RRLAEAQSNYKAVLEKM 380
Query: 252 QNLKEHEDYIAAEQV 296
H+ + EQ+
Sbjct: 381 IRDAMHQSVVYKEQL 395
>06_01_0641 -
4652380-4653771,4653850-4654521,4654536-4654707,
4655515-4655690
Length = 803
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 78 KEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLAKAFTDLKNILETEQN 257
KEA K + +++ +E + +ES M + + ++ AKA D +
Sbjct: 366 KEALNAKQKAMELQRWKAEEEQRTHDARLTEESAMALIEREKAKAKAAMDAAEASQRIAE 425
Query: 258 LKEHEDYIAAEQVLKEAE 311
L+ + A +++LKEAE
Sbjct: 426 LEVQKRITAEKKLLKEAE 443
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 78 KEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLMMVPDCQR 203
K+ E+++N I+DE D +N + ++ + E+ +M CQR
Sbjct: 71 KKQEEEENNTISIEDEMCDANNKKGKKMLTGENALMCHQCQR 112
>09_02_0170 - 5273607-5273929,5274272-5274350,5274627-5274629
Length = 134
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +3
Query: 3 RGRIRQIKIKTGVVKRITKEKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEEVLQESLM 182
R ++R+ I V + ++K EKE +++K + +K K E +++ +K+EE ++
Sbjct: 59 RKQMRRTHIVIDTVTPVDEKK---EKEEKEKKEKEEKEKKEKEEKEKKKKEEEQNNPKIV 115
Query: 183 MVP 191
P
Sbjct: 116 CTP 118
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +3
Query: 3 RGRIRQIKIKTGVVKRITKEKIVYEKEAEQQKNRIQKIKDEGQDEHNIRKQEE 161
+G++ K+ V R +E + +EAE++K R ++ + ++E ++K+EE
Sbjct: 413 KGKVDMKKLPKHV--REMQEALARRQEAEERKKREEEERLRKEEEERLKKEEE 463
>02_01_0020 -
127572-127637,127760-127819,127903-128004,128099-128194,
128649-128756,128849-128899,129018-130118
Length = 527
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Frame = +3
Query: 42 VKRITKEKIVY----EKEAEQQKNRIQKIKDEGQDE 137
+K+I E++++ E + E+Q++R ++ +DEG+DE
Sbjct: 59 LKQIQSERVIHDLFAELQRERQRDRQEEDEDEGEDE 94
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 33 TGVVKRITKEKIVYEKEAEQQKN--RIQKIKDEGQDEHNIRKQEE 161
TG ++ I + + EKE E+Q+ ++K +DE +++ RK +E
Sbjct: 13 TGSLRNIERVWVAEEKEKEEQRKIQELKKQQDEEREKAAFRKLQE 57
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 57 KEKIVYEKEAEQQKNRIQKIKDEGQDE 137
K+K +K+A+Q+KN +KIKD+ +DE
Sbjct: 447 KDKRAKKKQAKQKKNN-RKIKDKERDE 472
>04_03_0840 - 20224333-20224403,20224782-20225046
Length = 111
Score = 27.5 bits (58), Expect = 9.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 487 EFWGRRWWW 461
E+W RRWWW
Sbjct: 44 EWWHRRWWW 52
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 60 EKIVYEKEAEQQKNRIQKIKDEGQDE 137
E+ + EKE E++K R+ +K +DE
Sbjct: 620 ERQILEKEKEEEKKRLSVLKKSAEDE 645
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,350,355
Number of Sequences: 37544
Number of extensions: 197806
Number of successful extensions: 802
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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