Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L16
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.71 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.71 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 91  KRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 213
           K+P++A+ML++   R ++ +E    +   I +  G  W ++
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 91  KRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 213
           K+P++A+ML++   R ++ +E    +   I +  G  W ++
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -3

Query: 96  PLRLVRHFIFF-PDGKNFEIIFELVHN 19
           P R +  +I   P G NFEI FE  +N
Sbjct: 307 PFRALTFWIIVAPAGSNFEIGFENYYN 333


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 272 SLAYCSLALAAFSSQILLSFIDFHISPPFLAISVTFS 162
           +L YCSLA+      ++       I+ P L I V+ S
Sbjct: 412 ALVYCSLAIFVLCELLIEGTTSILINVPSLIIHVSTS 448


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 244 LLSLPKYFYLSLISTFHLLFWL 179
           LL +  ++Y  +I T HLLF L
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLL 131



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 247 WLLSLPKYFYLSLISTFHLLF 185
           +LL +  +F   +I T HLLF
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,932
Number of Sequences: 336
Number of extensions: 1860
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)