Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L13
         (562 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F9Z5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.0  
UniRef50_A7DS47 Cluster: Phosphomethylpyrimidine kinase; n=1; Ca...    32   8.0  

>UniRef50_Q2F9Z5 Cluster: Putative uncharacterized protein; n=1;
           Vibrio sp. DAT722|Rep: Putative uncharacterized protein
           - Vibrio sp. DAT722
          Length = 258

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +3

Query: 396 QKIVMIFRNKKCLMHFHLIS*LLKYTSSLRLPIMGVLNNLYNIIY*SILNL 548
           +KIV+   +K+ +  FHL+   L  T +++L  +GV   LY++IY SI N+
Sbjct: 24  KKIVLDSDDKERIQAFHLLVCYLYSTITIKL--LGVDKGLYSLIYASIFNI 72


>UniRef50_A7DS47 Cluster: Phosphomethylpyrimidine kinase; n=1;
           Candidatus Nitrosopumilus maritimus SCM1|Rep:
           Phosphomethylpyrimidine kinase - Candidatus
           Nitrosopumilus maritimus SCM1
          Length = 432

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +1

Query: 271 GIWPHCPLCQHHILF*EGQPKITEDQVGLKNKIITYI*NVI 393
           GI+ + P CQ + +F + +PK T+D +G+  +I+    NV+
Sbjct: 274 GIYKNIPECQTNFVFSKQRPKSTKDVLGISGRIVKAGTNVL 314


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,755,049
Number of Sequences: 1657284
Number of extensions: 11185977
Number of successful extensions: 20356
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20353
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)