Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L13
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 85  CQNTPIGI 108
           CQNTPIGI
Sbjct: 206 CQNTPIGI 213


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 85  CQNTPIGI 108
           CQNTPIGI
Sbjct: 206 CQNTPIGI 213


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 251 EPMSIDVESGHTAHCASIIYYFERVNP 331
           EP++   E      C  +IY F  ++P
Sbjct: 190 EPLAFSPEDLDPFACTHVIYAFATIDP 216


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 366 NYNLYIKCY*QKIVMI 413
           NYN   KCY  ++V+I
Sbjct: 48  NYNFTKKCYFLRMVLI 63


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +2

Query: 362 TKL*PIYKMLLTENCDD 412
           +K+ P+YK L+ + C++
Sbjct: 750 SKIPPLYKDLVAKRCEE 766


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,943
Number of Sequences: 336
Number of extensions: 3316
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)