Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L11
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          25   0.42 
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              25   0.56 
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    23   3.0  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    23   3.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   3.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   5.2  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   6.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.8  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   9.0  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 299 TINWTVILRPFQSLVALAMSSPTFFGERPRGPILG 195
           +I   VIL  F  + AL++S P  FG    GP  G
Sbjct: 11  SIRHAVILASFVWIYALSLSLPPLFGWGSYGPEAG 45


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 493 VKEILGTAQSVGCTVEGRAPHDIIDDINSGAL 588
           +K  L T QSV C  E      IIDDIN G +
Sbjct: 22  LKSGLHTVQSV-CMKEIGTAQQIIDDINEGKI 52


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 431 SSIVIFPLCLMFFCFLRSR 375
           SS VIF +  + F FLR+R
Sbjct: 14  SSCVIFGVLFVLFSFLRTR 32


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 431 SSIVIFPLCLMFFCFLRSR 375
           SS VIF +  + F FLR+R
Sbjct: 14  SSCVIFGVLFVLFSFLRTR 32


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 131 LGSNLGGIVLTNYCNNKSLYNNSK 60
           LG+N+  +++   C N    NN++
Sbjct: 570 LGANVNDLIMNTRCANSDNQNNNQ 593


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 379 DRKKQKNIKHNGNITMEDVIGIAKIMRP 462
           +++ ++  +  G + ME+ +  AK MRP
Sbjct: 182 EQEAKRRFEKYGQLFMEETLKAAKRMRP 209


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 143 ILISLGSNLGGIVLTNYCNNKSLYNN 66
           I+ SL +N       NY NN + YNN
Sbjct: 314 IISSLSNNYKYSNYNNYNNNYNNYNN 339


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 143 ILISLGSNLGGIVLTNYCNNKSLYNNSKPMNLD 45
           I+ SL +N       NY NN + YN     N++
Sbjct: 81  IISSLSNNYNYSNYNNYNNNYNNYNKKLYYNIN 113


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 484  SGSVKEILGTAQSVGCTVEGRAPHDIIDDINSGA 585
            +G  +   GT+ S G     + P D+ + I  G+
Sbjct: 1244 AGIAETSAGTSNSRGAAQMSKVPRDVSEGIYDGS 1277


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/40 (30%), Positives = 15/40 (37%)
 Frame = +3

Query: 411 WKYHNGRCHWHCQDNASSFNGTLPLRLSKRNPWHSTICWM 530
           W +   R H   Q     F   LP  L  R P  + + WM
Sbjct: 320 WNFRGPRTHRMPQLIRKIFLKYLPTILMMRRPKKTRLRWM 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,645
Number of Sequences: 438
Number of extensions: 3672
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)