Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L10
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.3  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   5.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.2  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 36  LQKKKEQSPLFMYNWKSYKY 95
           L  +  Q   F+YN +SY Y
Sbjct: 405 LSPESRQYTAFLYNGRSYTY 424


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 139 QCPMRPLRKQRRGPRGT 189
           QC   PLRK R   +GT
Sbjct: 61  QCSNSPLRKARYTEKGT 77


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 52  NSHHYLCTTGKVTNTIVF 105
           NS  Y C   +  NT++F
Sbjct: 380 NSIQYFCLMARCLNTLIF 397


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +3

Query: 468 GWPHHWAFPK 497
           GWP H   PK
Sbjct: 581 GWPQHMLIPK 590


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +3

Query: 468 GWPHHWAFPK 497
           GWP H   PK
Sbjct: 580 GWPQHMLLPK 589


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -1

Query: 143 HWRGYFNHKSTRRKTIVFVTFPVVH 69
           HW G+    S     + FVT   +H
Sbjct: 134 HWHGHHQKNSPYMDGVPFVTQCPIH 158


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 450 VYLVYTLCPAFNCDIYKV 397
           +YL+++ CP     I K+
Sbjct: 155 LYLIFSYCPIVTTGIIKI 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,511
Number of Sequences: 336
Number of extensions: 2262
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)