Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L10
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13748-1|BAA02897.1| 406|Homo sapiens eukaryotic initiation fac... 39 0.010
BT019881-1|AAV38684.1| 406|Homo sapiens eukaryotic translation ... 39 0.010
BT019880-1|AAV38683.1| 406|Homo sapiens eukaryotic translation ... 39 0.010
BC073752-1|AAH73752.1| 406|Homo sapiens eukaryotic translation ... 39 0.010
BC009585-1|AAH09585.1| 406|Homo sapiens eukaryotic translation ... 39 0.010
BC006380-1|AAH06380.1| 473|Homo sapiens Unknown (protein for IM... 39 0.010
D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation fac... 38 0.030
BT009860-1|AAP88862.1| 407|Homo sapiens eukaryotic translation ... 38 0.030
BC048105-1|AAH48105.1| 408|Homo sapiens eukaryotic translation ... 38 0.030
BC016295-1|AAH16295.1| 179|Homo sapiens EIF4A2 protein protein. 38 0.030
BC015842-1|AAH15842.1| 407|Homo sapiens eukaryotic translation ... 38 0.030
BC013708-1|AAH13708.1| 407|Homo sapiens eukaryotic translation ... 38 0.030
BC012547-1|AAH12547.1| 408|Homo sapiens eukaryotic translation ... 38 0.030
X79538-1|CAA56074.1| 411|Homo sapiens translation initiation fa... 36 0.092
D21853-1|BAA04879.2| 412|Homo sapiens KIAA0111 protein. 36 0.092
CR456750-1|CAG33031.1| 411|Homo sapiens DDX48 protein. 36 0.092
BC011151-1|AAH11151.1| 411|Homo sapiens eukaryotic translation ... 36 0.092
BC004386-1|AAH04386.1| 411|Homo sapiens eukaryotic translation ... 36 0.092
BC003662-1|AAH03662.1| 411|Homo sapiens eukaryotic translation ... 36 0.092
>D13748-1|BAA02897.1| 406|Homo sapiens eukaryotic initiation factor
4AI protein.
Length = 406
Score = 39.1 bits (87), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+TSI EMP +VA+LI
Sbjct: 381 KRTLRDIETFYNTSIEEMPLNVADLI 406
>BT019881-1|AAV38684.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 39.1 bits (87), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+TSI EMP +VA+LI
Sbjct: 381 KRTLRDIETFYNTSIEEMPLNVADLI 406
>BT019880-1|AAV38683.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 39.1 bits (87), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+TSI EMP +VA+LI
Sbjct: 381 KRTLRDIETFYNTSIEEMPLNVADLI 406
>BC073752-1|AAH73752.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 39.1 bits (87), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+TSI EMP +VA+LI
Sbjct: 381 KRTLRDIETFYNTSIEEMPLNVADLI 406
>BC009585-1|AAH09585.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 39.1 bits (87), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+TSI EMP +VA+LI
Sbjct: 381 KRTLRDIETFYNTSIEEMPLNVADLI 406
>BC006380-1|AAH06380.1| 473|Homo sapiens Unknown (protein for
IMAGE:4099962) protein.
Length = 473
Score = 39.1 bits (87), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+TSI EMP +VA+LI
Sbjct: 448 KRTLRDIETFYNTSIEEMPLNVADLI 473
>D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation factor
4AII protein.
Length = 407
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 382 KRILRDIETFYNTTVEEMPMNVADLI 407
>BT009860-1|AAP88862.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 382 KRILRDIETFYNTTVEEMPMNVADLI 407
>BC048105-1|AAH48105.1| 408|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 408
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 383 KRILRDIETFYNTTVEEMPMNVADLI 408
>BC016295-1|AAH16295.1| 179|Homo sapiens EIF4A2 protein protein.
Length = 179
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 154 KRILRDIETFYNTTVEEMPMNVADLI 179
>BC015842-1|AAH15842.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 382 KRILRDIETFYNTTVEEMPMNVADLI 407
>BC013708-1|AAH13708.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 382 KRILRDIETFYNTTVEEMPMNVADLI 407
>BC012547-1|AAH12547.1| 408|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 408
Score = 37.5 bits (83), Expect = 0.030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 540 RRALKDIEEFYHTSISEMPSDVANLI 463
+R L+DIE FY+T++ EMP +VA+LI
Sbjct: 383 KRILRDIETFYNTTVEEMPMNVADLI 408
>X79538-1|CAA56074.1| 411|Homo sapiens translation initiation
factor protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.092
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP +VA+LI
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>D21853-1|BAA04879.2| 412|Homo sapiens KIAA0111 protein.
Length = 412
Score = 35.9 bits (79), Expect = 0.092
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP +VA+LI
Sbjct: 388 RILRDIEQYYSTQIDEMPMNVADLI 412
>CR456750-1|CAG33031.1| 411|Homo sapiens DDX48 protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.092
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP +VA+LI
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>BC011151-1|AAH11151.1| 411|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 3 protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.092
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP +VA+LI
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>BC004386-1|AAH04386.1| 411|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 3 protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.092
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP +VA+LI
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>BC003662-1|AAH03662.1| 411|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 3 protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.092
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP +VA+LI
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,820,564
Number of Sequences: 237096
Number of extensions: 1304474
Number of successful extensions: 3056
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3056
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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