Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L10
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 35 0.044
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 35 0.044
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical pr... 32 0.31
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 32 0.31
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 32 0.31
U41991-9|AAA83349.1| 297|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 29 2.2
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 2.2
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 2.2
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 34.7 bits (76), Expect = 0.044
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP ++A++I
Sbjct: 375 RILRDIEQYYSTQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 34.7 bits (76), Expect = 0.044
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = -3
Query: 537 RALKDIEEFYHTSISEMPSDVANLI 463
R L+DIE++Y T I EMP ++A++I
Sbjct: 375 RILRDIEQYYSTQIDEMPMNIADII 399
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 415 IERRTQSIDQINVDTSDEVGHITGHFRNTSVIELLNILERSP 540
+E RT ++ ++N E+ H+ H R+ ++IE L + +SP
Sbjct: 154 LENRTVAVKKVNQLKETEIKHLR-HLRHQNIIEFLGVCSKSP 194
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 415 IERRTQSIDQINVDTSDEVGHITGHFRNTSVIELLNILERSP 540
+E RT ++ ++N E+ H+ H R+ ++IE L + +SP
Sbjct: 154 LENRTVAVKKVNQLKETEIKHLR-HLRHQNIIEFLGVCSKSP 194
>Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical
protein F33E2.2c protein.
Length = 577
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 415 IERRTQSIDQINVDTSDEVGHITGHFRNTSVIELLNILERSP 540
+E RT ++ ++N E+ H+ H R+ ++IE L + +SP
Sbjct: 154 LENRTVAVKKVNQLKETEIKHLR-HLRHQNIIEFLGVCSKSP 194
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 415 IERRTQSIDQINVDTSDEVGHITGHFRNTSVIELLNILERSP 540
+E RT ++ ++N E+ H+ H R+ ++IE L + +SP
Sbjct: 154 LENRTVAVKKVNQLKETEIKHLR-HLRHQNIIEFLGVCSKSP 194
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 415 IERRTQSIDQINVDTSDEVGHITGHFRNTSVIELLNILERSP 540
+E RT ++ ++N E+ H+ H R+ ++IE L + +SP
Sbjct: 154 LENRTVAVKKVNQLKETEIKHLR-HLRHQNIIEFLGVCSKSP 194
>U41991-9|AAA83349.1| 297|Caenorhabditis elegans Hypothetical
protein C42D4.11 protein.
Length = 297
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 406 NIAIERRTQSIDQI--NVDTSDEVGHITGHFRNTS 504
N+ I +T S+D I ++ T E+G I GHF NTS
Sbjct: 66 NMIIALKTVSLDPITESMCTPFELGTINGHFNNTS 100
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 501 SISEMPSDVANLI*GVH-VYLVYTLCPAFNCDIY 403
+ISE+ SDV N+ + Y++Y LC F+C IY
Sbjct: 2206 AISEL-SDVPNMAGDLQKCYMLYNLCQGFSCCIY 2238
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 34 YYKKKKNSHHYLCTTGKVT 90
Y KK+ HHYLC TG T
Sbjct: 716 YAADKKHKHHYLCDTGVYT 734
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 34 YYKKKKNSHHYLCTTGKVT 90
Y KK+ HHYLC TG T
Sbjct: 730 YAADKKHKHHYLCDTGVYT 748
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,281,859
Number of Sequences: 27780
Number of extensions: 210017
Number of successful extensions: 623
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -