Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L09
(487 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 109 4e-23
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 95 1e-18
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 93 4e-18
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 92 5e-18
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 92 7e-18
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 88 1e-16
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 80 3e-14
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 77 3e-13
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 76 5e-13
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 68 1e-10
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 62 5e-09
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 61 1e-08
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 57 2e-07
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 48 1e-04
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 44 0.002
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 43 0.004
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 39 0.052
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 36 0.37
UniRef50_Q5LT47 Cluster: Aminotransferase, putative; n=6; Alphap... 35 1.1
UniRef50_Q47NA8 Cluster: Putative uncharacterized protein precur... 32 7.9
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 109 bits (261), Expect = 4e-23
Identities = 56/113 (49%), Positives = 68/113 (60%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LDI +DL ++F++G+ANVAA+SL IGYPTVAS PHSI NGFKNLLA+A T++ F EA
Sbjct: 204 LDITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAVAVATDITFKEAE 263
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 347
K ++ DPS F ESDDDMGFGLFD
Sbjct: 264 QAKAFVADPSAFA---ALVPAAQEDKKEDDKAAAAAEESEEESDDDMGFGLFD 313
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 94.7 bits (225), Expect = 1e-18
Identities = 51/114 (44%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++ T+ F A
Sbjct: 204 LDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAE 263
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXS-ESDDDMGFGLFD 347
+K ++ DPS FV S ESD+DMGFGLFD
Sbjct: 264 KVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 92.7 bits (220), Expect = 4e-18
Identities = 48/112 (42%), Positives = 63/112 (56%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
L++ +DL EKF AGV+ + ALSL+I YPTVA+APH N +KN+LA+A TE F +A
Sbjct: 207 LNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAE 266
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLF 344
+KE++KDP+KF ESD DMGF LF
Sbjct: 267 NVKEFLKDPTKFA--VAVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 92.3 bits (219), Expect = 5e-18
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LDIKPEDLR KF GVAN+A +SL IGYPT+AS PH+IA GF+NLL IAAVTEV+F A
Sbjct: 778 LDIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLLVIAAVTEVEFKGAE 837
Query: 189 T 191
T
Sbjct: 838 T 838
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 91.9 bits (218), Expect = 7e-18
Identities = 45/113 (39%), Positives = 61/113 (53%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LDI + L ++FL GV N+A++ L IGYPT+AS PH+I NG+K +LA+ T+ F A
Sbjct: 207 LDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAE 266
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 347
+K Y+ DP+ F ESD+DMGFGLFD
Sbjct: 267 KVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 87.8 bits (208), Expect = 1e-16
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LD+ + L EKF +G++ V +L+L++ YPT+A+APH N +KN LAIA T+ F +A
Sbjct: 206 LDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAE 265
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDD---DMGFGLFD 347
+KE++KDPSKFV ESD+ + GFGLFD
Sbjct: 266 KVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFD 321
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 79.8 bits (188), Expect = 3e-14
Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +3
Query: 54 VANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEATTIKEYIKDPSKFVXX 233
V NVA++ L IGYPTVAS PHSI NG+K +LA++ T+ F A +K ++ DPS FV
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 60
Query: 234 XXXXXXXXXXXXXXXXXXXXXXXXXS-ESDDDMGFGLFD 347
S ESD+DMGFGLFD
Sbjct: 61 APVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 99
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 76.6 bits (180), Expect = 3e-13
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
L + + L KF+ GV N+AA+SL++G PT ASAPHSI +GFKNL++IA V + F++A
Sbjct: 214 LKLTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSIAHVVDYTFSQAE 273
Query: 189 TIKEYIKDPSK 221
+ +KDPSK
Sbjct: 274 GLLAVLKDPSK 284
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 75.8 bits (178), Expect = 5e-13
Identities = 46/111 (41%), Positives = 52/111 (46%)
Frame = +3
Query: 15 IKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEATTI 194
I EDL KF G+ N+AA+SL IGYPTVAS PHS+ N FKNLLAI+ T F+ A
Sbjct: 202 ISEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKF 261
Query: 195 KEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 347
K ESDDDMG GLFD
Sbjct: 262 K-------SAAAAAPVRAAPSAAAPRAAAKKVVVEEKKEESDDDMGMGLFD 305
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LDI ED+ EKF GV+NVAALS + G T AS PH FKN++A+ ++ F
Sbjct: 204 LDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMK 263
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 347
+K+++++P F E D MGFG+FD
Sbjct: 264 ILKKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 62.5 bits (145), Expect = 5e-09
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LDI E + E + ++NVA++SL G PT ASAPHSI FKNLLA+ +EV F +A
Sbjct: 222 LDITSESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVFKNLLAVTYESEVTFKQAE 281
Query: 189 TIK 197
IK
Sbjct: 282 DIK 284
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
L I E L EKF G+ NV L+L++GYP ASAPH + + FK++ AIA E + +
Sbjct: 206 LAITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDIAAIAIAIEHNMKQIE 265
Query: 189 TIKEYIKDP 215
+++ + DP
Sbjct: 266 DLQKLLSDP 274
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +3
Query: 24 EDLREKFLA-GVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNE 182
+D+ EK+L G++NVAALSL G PT A+ PH I + FK LL + TE +F+E
Sbjct: 215 DDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDE 268
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNE 182
L I P + + F +AA+SL+ GY T S PH I N FK+L AI T F E
Sbjct: 222 LSISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDLAAIGMETGYKFKE 279
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 6 RLDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNE 182
++ + D+ KF V NV+A+SL G+ ASAP+ +AN FK+L AI + F++
Sbjct: 221 QVSVNLNDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDLAAIGLQSGFIFDQ 279
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 42.7 bits (96), Expect = 0.004
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LD+ D+ +KF GV A+SL+ PT A+ PH + N F+ LL + + V F A
Sbjct: 211 LDLTESDIVKKFQEGVQAATAISLAANLPTEAACPHLMLNAFQALLGFSKESGVVFPLAE 270
Query: 189 TI 194
I
Sbjct: 271 KI 272
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 39.1 bits (87), Expect = 0.052
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
+DI ED+ ++ VAA SL G T AS P+++ N FK++L ++ + E +
Sbjct: 226 IDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDILHVSLGADFMIKEQS 285
Query: 189 TI 194
+
Sbjct: 286 MV 287
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 36.3 bits (80), Expect = 0.37
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNE-- 182
L+I + K+ AG+ +L+L +P + + PH + K+ I A E D E
Sbjct: 205 LEIDDSVMEAKWNAGLEAFVSLALGANFPCLPAIPHIFMDTAKSF--IGAGVEADVTEIP 262
Query: 183 -ATTIKEYIKDPSKF 224
+KE + DPSKF
Sbjct: 263 LVKRVKEILADPSKF 277
>UniRef50_Q5LT47 Cluster: Aminotransferase, putative; n=6;
Alphaproteobacteria|Rep: Aminotransferase, putative -
Silicibacter pomeroyi
Length = 415
Score = 34.7 bits (76), Expect = 1.1
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3
Query: 21 PEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEATTIKE 200
P DLR + + V N A + I +PT+ SAP + G NLL+ AAVT++ A I+E
Sbjct: 333 PGDLRGREMELVQNCRARNFGI-WPTL-SAPVQVRIGILNLLSRAAVTDIVTRFAEAIRE 390
>UniRef50_Q47NA8 Cluster: Putative uncharacterized protein
precursor; n=4; Bacteria|Rep: Putative uncharacterized
protein precursor - Thermobifida fusca (strain YX)
Length = 307
Score = 31.9 bits (69), Expect = 7.9
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 21 PEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG-FKNLLAIAAVTE-VDFNEATTI 194
PEDLRE+ + G A AL +G AS P G ++A+ A +E V F +
Sbjct: 223 PEDLRERAMLGDAGANALGALLGLAAAASCPRWARLGLLAGVVALTAASEYVSFTHVIAV 282
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,455,415
Number of Sequences: 1657284
Number of extensions: 5566096
Number of successful extensions: 17801
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17794
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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