Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L09
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 112 1e-25
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 31 0.59
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 31 0.59
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 31 0.59
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 31 0.59
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 3.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.1
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 27 9.5
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 27 9.5
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 112 bits (269), Expect = 1e-25
Identities = 55/113 (48%), Positives = 71/113 (62%)
Frame = +3
Query: 9 LDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFNEAT 188
LD+ E+LR++FL+GV NVA++SL++ YPT+AS HS+ANG +N+L +AAVT+V F EA
Sbjct: 204 LDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAE 263
Query: 189 TIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 347
TIK +I DPSKF ESDDDMGFGLFD
Sbjct: 264 TIKAFIADPSKF----AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 30.7 bits (66), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 312 ESDDDMGFGLFD 347
ESDDDMGFGLFD
Sbjct: 96 ESDDDMGFGLFD 107
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 312 ESDDDMGFGLFD 347
ESDDDMGFGLFD
Sbjct: 100 ESDDDMGFGLFD 111
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 30.7 bits (66), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 312 ESDDDMGFGLFD 347
ESDDDMGFGLFD
Sbjct: 99 ESDDDMGFGLFD 110
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 312 ESDDDMGFGLFD 347
ESDDDMGFGLFD
Sbjct: 100 ESDDDMGFGLFD 111
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 390 VLMRPHVYYDAHVLSQRDQSPCRRHS 313
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 390 VLMRPHVYYDAHVLSQRDQSPCRRHS 313
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 390 VLMRPHVYYDAHVLSQRDQSPCRRHS 313
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 390 VLMRPHVYYDAHVLSQRDQSPCRRHS 313
V++ P YY+ VL QR PC HS
Sbjct: 986 VVVLPAEYYEGTVLRQRAPQPCLSHS 1011
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 73 SRCPSGTRRSRLRLIPSR 126
SRC GT SR LIPSR
Sbjct: 333 SRCSGGTPTSRTSLIPSR 350
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 73 SRCPSGTRRSRLRLIPSR 126
SRC GT SR LIPSR
Sbjct: 229 SRCSGGTPTSRTSLIPSR 246
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 73 SRCPSGTRRSRLRLIPSR 126
SRC GT SR LIPSR
Sbjct: 279 SRCSGGTPTSRTSLIPSR 296
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 73 SRCPSGTRRSRLRLIPSR 126
SRC GT SR LIPSR
Sbjct: 333 SRCSGGTPTSRTSLIPSR 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,457,745
Number of Sequences: 27780
Number of extensions: 129799
Number of successful extensions: 379
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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