Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L08
(612 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 85 4e-17
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 84 7e-17
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 58 4e-09
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 57 1e-08
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 50 1e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 47 1e-05
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 46 3e-05
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 44 1e-04
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 4e-04
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 42 5e-04
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 39 0.004
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 38 0.005
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 37 0.015
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.079
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_8810| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 33 0.14
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 32 0.32
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 0.56
SB_37757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_35561| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00092) 29 3.0
SB_16210| Best HMM Match : PHD (HMM E-Value=0.076) 29 3.9
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 28 5.2
SB_33997| Best HMM Match : Astacin (HMM E-Value=0) 28 6.9
SB_49193| Best HMM Match : Exo_endo_phos (HMM E-Value=0.025) 27 9.1
SB_44280| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_29863| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_14875| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/92 (44%), Positives = 54/92 (58%)
Frame = +3
Query: 126 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 305
I ++D + AG +LVVIDF ATWCGPCK I P ++ + D +V LKVDVD+
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD-VVFLKVDVDQ 69
Query: 306 CEDIAAEYNINAMPTFVFVKATKKLEEFSGAN 401
C+ A I AMPTF F K++E GA+
Sbjct: 70 CQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 84.2 bits (199), Expect = 7e-17
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +3
Query: 123 SIHIKDFDDLKT-RLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 299
++ + + D T L+ AG KLVV DF A+WCGPCK I P ++ + + V LK+DV
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQA-VFLKIDV 66
Query: 300 DECEDIAAEYNINAMPTFVFVKATKKLEEFSGAN 401
D C+++AA+ + AMPTF F K K++E GA+
Sbjct: 67 DVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +3
Query: 132 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 311
I++ + + ++ DKLVVIDF A WCGPC+ I PK +MA E + K+DVDE E
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDELE 74
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.3 bits (137), Expect = 2e-09
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +3
Query: 210 WCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVKATKKLEEF 389
WC PCK++ P+LD + E + + KVD+D ++A + +NA+PT + +K K + +F
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKF 61
Query: 390 SG 395
G
Sbjct: 62 EG 63
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 174 GDKLVVIDFMATWCGPCKMIGPKLDEM--ANEMSDSIVVLKVDVDECEDIAAEYNINAMP 347
G+K +++F A WCG CK + P +++ A S +++ KVD D D+ + +++ P
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFP 97
Query: 348 TF-VFVKATKKLEEFSG 395
T F K + EE++G
Sbjct: 98 TIKYFPKGSTTPEEYNG 114
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 177 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVD 302
+++ IDF ATWCGPC+MIGPK +EMA E + KVDVD
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKEFK-GVKCAKVDVD 51
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 204 ATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVKATKKLE 383
A WC PCK++ P+LD + E + + KVD+D ++A + +NA+PT + +K K +E
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 51.2 bits (117), Expect = 6e-07
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +3
Query: 171 AGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPT 350
A + V+DF A WCGPC PK +++A + + KV+ ++ + +E NI++ PT
Sbjct: 449 ASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPT 508
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 IDFMATWCGPCKMIGPKLDEMANEMSDSIVVL-KVDVDECEDIAAEYNINAMPTFV 356
+DF A WC PC + P+ + A V VD + +YNI + PT +
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTI 362
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +3
Query: 120 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLK 290
+S + D D + AG +++++F A WCG CK + P+ + A + + + + K
Sbjct: 536 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 595
Query: 291 VDVDEC-EDIAAEYNINAMPTFVFVKATKKLEEFSG 395
VD E +D ++Y ++ PT + + +++ G
Sbjct: 596 VDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDG 631
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 180 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVD 296
K V+I+F A WCG CK + PK +E+ ++ D IV+ K+D
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMD 921
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Frame = +3
Query: 138 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEM----SDSIVVLKVDVD- 302
+ DD + K V++DF A WC CK + P ++A E+ +S+ + KVD
Sbjct: 138 ELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSA 197
Query: 303 ---ECEDIAAEYNINAMPTFVFVKATKKLEEFSGAN 401
+ +YN+ +PT K +EEF G N
Sbjct: 198 NNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNN 233
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +3
Query: 177 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSD---SIVVLKV--DVDECE 311
++ V++DF A WC C+ + P D A ++ D S+ KV +DEC+
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFAKVIYSIDECK 117
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Frame = +3
Query: 123 SIHIKDFDDLKTRLSEAGDK------LVVIDFMATWCGPCKMIGPKLDEMANEM---SDS 275
S +K+ DD+ S+ D+ +++++F A WCG CK + P+ + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPP 113
Query: 276 IVVLKVDVDECEDIAAEYNINAMPTF-VFVKAT 371
+ K+D DIA ++++ PT +F K T
Sbjct: 114 VPFAKMDATVASDIAQRFDVSGYPTLKIFRKGT 146
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +3
Query: 177 DKLVVIDFMATWCGPCKMIGPKLDEMANEM---SDSIVVLKVDVDECEDIAAEYNINAMP 347
+ L++++F A WCG CK + P+ ++ A E+ I + VD ++A +Y + P
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYP 252
Query: 348 TF-VFVKATKKLEEFSG 395
T VF K K E+ G
Sbjct: 253 TLKVFRKG--KATEYKG 267
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 180 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPTF 353
K V+I+F A WCG + P ++ + +IV+ K+D D+ + Y + PT
Sbjct: 544 KDVLIEFYAPWCGIA--LEPTFKKLGKHFRNDKNIVIAKIDA-TANDVPSTYAVEGFPTI 600
Query: 354 VFVKATKK 377
F + K
Sbjct: 601 YFATSKDK 608
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +3
Query: 171 AGDKLVVIDFMATWCGPCKMIGPKLDEMANEM---SDSIVVLKVDVDECEDIAAEYNINA 341
A +K V+++F A WCG CK + P+ + A ++ I + KVD + ++ +
Sbjct: 39 AANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQG 98
Query: 342 MPTFVFVKATKKLEEFSG 395
PT F K K E G
Sbjct: 99 YPTIKFFKDGKPSEYAGG 116
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +3
Query: 135 KDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECED 314
K+FD++ + DK V ++F A WCG CK + P D++ + D ++ +D +
Sbjct: 392 KNFDEV----ARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTAN 447
Query: 315 IAAEYNINAMPTFVFVKATKKLEEFSG 395
+++ PT + + +++G
Sbjct: 448 EVEGVKVHSFPTIKYFPKEGEAVDYNG 474
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 VVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPTFVF 359
V++ F A WCG CK PK ++ A D + V K+D + D+ + +N PT +
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRY 226
Query: 360 VKATKKLEEFSGANV 404
K + E+ G V
Sbjct: 227 YLYGKFVVEYDGDRV 241
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 186 VVIDFMATWCGPCKMIGPKLDEMANEMSD---SIVVLKVDVDECEDIAAEYNINAMPTFV 356
V++ + A WCG C + P + A + D + + VD + +D+A + + PT
Sbjct: 70 VLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVK 129
Query: 357 FVKAT 371
KA+
Sbjct: 130 LYKAS 134
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 183 LVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTF-VF 359
L +++F A WCG C+ + P+ + A E+ + V +D A+ Y + PT VF
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158
Query: 360 ---VKATKKLEEFSG 395
+K + +E++ G
Sbjct: 159 AAGIKNSHSVEDYQG 173
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 41.5 bits (93), Expect = 5e-04
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = +3
Query: 63 LCLNTVILYISVNKFL*YKMSIHIK---DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMI 233
L + L IS+ F S+H K +F + G K V I F A W C+ I
Sbjct: 4 LFITNTFLLISLTIFT--STSVHCKKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
Query: 234 GPKLDEMANEMS--DSIVVLKVDVDECEDIAAEYNINAMPTF-VFVKATKKLEEFSG 395
D++A+E + D IVV K + E IA Y I+ P F F+K + E + G
Sbjct: 62 LQIFDQVADEFADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFIKGSTTEETYDG 118
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 120 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEM 266
+S + D D + AG +++++F A WCG CK + P+ + A +
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEAL 59
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 LSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDE 305
L E+ K+ +IDF A+WC PC++ P + + NE + + ++ V +D+
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENPAVVALYNEYHAKGLNIIGVSLDK 220
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 171 AGD---KLVVIDFMATWCGPCKMIGPKL---DEMANEMSDSIVVLKVDVDECEDIAAEYN 332
AGD K+V I F A WC PC+ P+L + + +++ V+ V D +D +Y
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPELVSTYDAVRKANNAFEVIFVSSDRSQDSFKDY- 226
Query: 333 INAMPTF 353
+N MP F
Sbjct: 227 LNTMPWF 233
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 180 KLVVIDFMATWCGPCKMIGPKLDE 251
K+V + F A WC PC+ PKL E
Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVE 53
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 177 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPT 350
D+ V++ F WCG C P L +A D + V ++D D+ D+ +++ P+
Sbjct: 535 DQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQ-NDLPWNLTVSSYPS 593
Query: 351 FVFVKATKK 377
+ A +K
Sbjct: 594 IILFPAGRK 602
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +3
Query: 183 LVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECED-----IAAEYNINAMP 347
++++DF A WC C+ + P+L+ AN ++ + VD C D + + I P
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVD-CTDPRSKVLCDNFKIEGYP 97
Query: 348 TFVFVKATKKLEEFSGANVD 407
+ K K ++ G D
Sbjct: 98 SVKLFKFGKYAGDYIGQRTD 117
>SB_8810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 177 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 356
DK+VVI F W C + L +A++ + V VD+ +C D Y + T +
Sbjct: 5 DKVVVIRFGHDWDPTCMKMDELLYSIADKCKNFAVFYLVDITQCPDFNKMYELYDPCTIM 64
Query: 357 FVKATKKL 380
F K +
Sbjct: 65 FFYRNKHI 72
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +3
Query: 126 IHIKD--FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSI---VVLK 290
+H++D FDD + + V++ F A WCG CK + P+ + A + + V+
Sbjct: 85 VHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAA 139
Query: 291 VDVDECEDIAAEYNINAMPTFVFVKATK 374
VD + + + + PT + T+
Sbjct: 140 VDATKEAALGKRFKVEGYPTGLSPNGTR 167
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 180 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD 272
K V++ F A WCG CK P+L A D
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPELMSAAKHHKD 243
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Frame = +3
Query: 153 KTRLSEAGD----KLVVIDFMATWCGPCKMIGPKL----DEMANEMSDSIVV-LKVDVDE 305
K L +AG+ K++ + F A WC PC+ P L +E+ E D +++ + D DE
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVIIFVSSDRDE 72
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 31.5 bits (68), Expect = 0.56
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 180 KLVVIDFMATWCGPCKMIGPKLDEMANEMS 269
+++++DF A WC C + PK ++ A +++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDLA 69
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 177 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDS 275
+K+V I F A+WC PC+ P L + E S
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEEKIQS 186
>SB_37757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 180 KLVVIDFMATWCGPCKMIGPKLDEMANEMS--DSIVVLKVDVDECEDIAAEYNI 335
KL V+DF C C I P L+EM + S D +V++ V + E+ + NI
Sbjct: 71 KLCVLDFFTYCCINCMHILPDLEEMERKFSEKDGLVIVGVHSAKFENERSSANI 124
>SB_35561| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00092)
Length = 813
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
V G V+AF N D K GVG +V +EF
Sbjct: 248 VTIPGYVYAFNNRDKKKGGGVGVYVKESIEF 278
>SB_16210| Best HMM Match : PHD (HMM E-Value=0.076)
Length = 280
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
VI G V AF N D K GVG +V +EF
Sbjct: 229 VIIPGYVRAFNNRDKKKGGGVGVYVKESIEF 259
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 404 DVRAGELFEFLGRLNKHESRHRVDVIFGGDVFAFVNVDLKN 282
D+ EL ++LG+ NK S+ + +V A + VDL+N
Sbjct: 291 DIAMKELEQYLGKTNKELSQTKTEVAEKEAAIASLRVDLQN 331
>SB_33997| Best HMM Match : Astacin (HMM E-Value=0)
Length = 507
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 317 DVFAFVNVDLKNNNGVGHFVSHLVEFGPDHLAGSAPSRHEV 195
D F ++ + N++G+G+ + L+ +GPD A S P H +
Sbjct: 360 DDFKKLDSAVVNSHGMGYDIDSLMHYGPDAFAKS-PGLHTI 399
>SB_49193| Best HMM Match : Exo_endo_phos (HMM E-Value=0.025)
Length = 236
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
V G V AF N D K GVG +V +EF
Sbjct: 82 VTIPGYVHAFNNRDKKKGGGVGVYVKESIEF 112
>SB_44280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
V G V AF N D K GVG +V +EF
Sbjct: 27 VTIPGYVHAFNNRDKKKGGGVGVYVKESIEF 57
>SB_29863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 590
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
V G V AF N D K GVG +V +EF
Sbjct: 216 VTIPGYVHAFNNRDKKKGGGVGVYVKESIEF 246
>SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
V G V AF N D K GVG +V +EF
Sbjct: 199 VTIPGYVHAFNNRDKKKGGGVGVYVKESIEF 229
>SB_14875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 332 VIFGGDVFAFVNVDLKNNNGVGHFVSHLVEF 240
V G V AF N D K GVG +V +EF
Sbjct: 27 VTIPGYVHAFNNRDKKKGGGVGVYVKESIEF 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,070
Number of Sequences: 59808
Number of extensions: 319928
Number of successful extensions: 855
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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