Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_L05
(450 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3GI78 Cluster: TRS120 targeting complex (TRAPP) compon... 34 1.2
UniRef50_A5TT08 Cluster: Possible transcriptional regulatory pro... 33 2.9
UniRef50_Q8IEM9 Cluster: Putative uncharacterized protein MAL13P... 33 2.9
UniRef50_Q7RR99 Cluster: Putative uncharacterized protein PY0083... 33 2.9
UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4... 33 2.9
UniRef50_A3PE85 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q8IBK4 Cluster: Putative uncharacterized protein MAL7P1... 33 3.8
UniRef50_Q8IJF8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_Q6LFM0 Cluster: DNA helicase, putative; n=1; Plasmodium... 31 8.8
UniRef50_Q54Y07 Cluster: Putative uncharacterized protein; n=1; ... 31 8.8
UniRef50_Q54FN7 Cluster: Putative uncharacterized protein; n=14;... 31 8.8
>UniRef50_A3GI78 Cluster: TRS120 targeting complex (TRAPP) component
involved in ER to Golgi membrane traffic; n=1; Pichia
stipitis|Rep: TRS120 targeting complex (TRAPP) component
involved in ER to Golgi membrane traffic - Pichia
stipitis (Yeast)
Length = 1353
Score = 34.3 bits (75), Expect = 1.2
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 301 FYLYIKYYFL*NNNTMNQKMLEI*PTIHIQADFEINGNNLMGELLVMISY 152
+ L K + + N T+ +K I P I+ D+EING M EL +++ Y
Sbjct: 959 YLLQFKPFRILNKETIMEKYRTIDPQSEIKIDYEINGRRGMKELKIILEY 1008
>UniRef50_A5TT08 Cluster: Possible transcriptional regulatory
protein; n=4; Fusobacterium nucleatum|Rep: Possible
transcriptional regulatory protein - Fusobacterium
nucleatum subsp. polymorphum ATCC 10953
Length = 670
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = -3
Query: 391 DNRDIC*SNVKINYVVKIIHNIYIYMRSIVFYLYIKYYFL*NNNTMNQKMLEI 233
+ ++IC + K+N ++ I N I ++I+ Y ++K +FL N N L+I
Sbjct: 609 NKKEICINGKKVNTIILINSNCEIKYKAII-YNFVKLFFLNNEFKFNNNRLDI 660
>UniRef50_Q8IEM9 Cluster: Putative uncharacterized protein
MAL13P1.41; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL13P1.41 - Plasmodium
falciparum (isolate 3D7)
Length = 885
Score = 33.1 bits (72), Expect = 2.9
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = -3
Query: 355 NYVVKIIHNIYIYMRSIVFYLYIKYYFL*NNNTMNQKMLEI*PTIHIQADFEINGNNLMG 176
NY+ I++NI+IY +F L+I YY N++N K L + I+ + +N L+
Sbjct: 410 NYIYNILNNIFIYAPVDLFALHIHYY-----NSLNIKFL-LTNIIYKLSYLNVNYLALVI 463
Query: 175 ELLVMISYKLYSKKYII 125
+ + YK +Y++
Sbjct: 464 SKIYKLLYKEKENEYVV 480
>UniRef50_Q7RR99 Cluster: Putative uncharacterized protein PY00833;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY00833 - Plasmodium yoelii
yoelii
Length = 1132
Score = 33.1 bits (72), Expect = 2.9
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 433 CLIINNILNGM-QL*DNRDIC*S---NVKINYVVKIIHNIYIYMRSIVFYLYIKYYFL 272
C++IN N M + + DI S N+K + + KIIH++ I+ S + KY+FL
Sbjct: 543 CILINFSYNNMFDIFNYPDIFLSENKNIKFSIIHKIIHSVNIFFNSFSILIKKKYFFL 600
>UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4
protein - Plasmodium falciparum
Length = 208
Score = 33.1 bits (72), Expect = 2.9
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = -3
Query: 430 LIINNILN---GMQL*DNRDIC*SNVKINYVV--KIIH--NIYIYMRSIVFYLYIKYY 278
+ INNI+N + L N DI N KI Y++ +I+ NIYIY+ ++ Y +IK Y
Sbjct: 115 IYINNIINKYYNINL-KNNDILFFNNKIKYIILKNLIYKYNIYIYISNLYKYNFIKIY 171
>UniRef50_A3PE85 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9301|Rep: Putative
uncharacterized protein - Prochlorococcus marinus
(strain MIT 9301)
Length = 585
Score = 32.7 bits (71), Expect = 3.8
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = -3
Query: 391 DNRDIC*SNVKINYVVKIIHNIYIYMRSIVFYLYIKYYFL*NNNTMNQKMLEI*PTIHIQ 212
DNR I S + +Y I N Y++++ I+F L+ K YF N + + + E+ I +
Sbjct: 227 DNRKILFSRISRDYKFNIKKNKYLFIKKILFDLF-KKYFSFNYHFYDNFLSELIDKISFE 285
Query: 211 ADFEINGNNLMGELL 167
+ I+ N +LL
Sbjct: 286 MIYIISKKNYCIQLL 300
>UniRef50_Q8IBK4 Cluster: Putative uncharacterized protein MAL7P1.134;
n=2; Plasmodium|Rep: Putative uncharacterized protein
MAL7P1.134 - Plasmodium falciparum (isolate 3D7)
Length = 3351
Score = 32.7 bits (71), Expect = 3.8
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Frame = -3
Query: 424 INNILNGMQL*DNRDIC*SNVKINYVVKI--------IHNIYIYMRSIVFYLYIKYYFL* 269
INNIL +++ N ++Y+VKI IHN YIY + I+ L+++Y
Sbjct: 2477 INNILINVEVIKCLYKSIINDSLHYIVKIRCIYSLCFIHNKYIYTQKIIQNLFLEYINSY 2536
Query: 268 NNNTMNQK 245
+N +NQK
Sbjct: 2537 YDNNLNQK 2544
>UniRef50_Q8IJF8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 310
Score = 32.3 bits (70), Expect = 5.0
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = -3
Query: 442 HFFCLIINNILNGMQL*-DNRDIC*SNVK--INYVVKIIHNIYIYMRSIVFYLYIKYYFL 272
+FFC N + + DN ++K + Y ++ IYIY+ S++ Y+YI ++FL
Sbjct: 161 YFFCCNFKNEFQILYIHKDNTVSFFKHIKKYMQYAFLVLFFIYIYI-SLIIYIYIFFFFL 219
Query: 271 *NNNTMNQKMLEI*PTIHIQADFEIN 194
+ + +L I T+++ F ++
Sbjct: 220 KDKGVLTTILLSI-STLNLNYQFYLD 244
>UniRef50_Q6LFM0 Cluster: DNA helicase, putative; n=1; Plasmodium
falciparum 3D7|Rep: DNA helicase, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1712
Score = 31.5 bits (68), Expect = 8.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 352 YVVKIIHNIYIYMRSIVFYLYIKYYFL*NNNTMNQKM 242
++ K+ H +IY + + +YY+ NNN KM
Sbjct: 540 FIYKLFHTCFIYQIPNFIFYFFRYYYRINNNINKHKM 576
>UniRef50_Q54Y07 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 79
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 364 VKINYVVKIIHNI-YIYMRSIVFYLYIKYYFL*NNNTMNQKMLE 236
VKI Y++K++H I + + S F+ + +YF+ N +N+ + E
Sbjct: 2 VKIIYIIKVLHIILFFFFFSFYFFPNLFFYFIINYKILNKYIKE 45
>UniRef50_Q54FN7 Cluster: Putative uncharacterized protein; n=14;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 3109
Score = 31.5 bits (68), Expect = 8.8
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = -3
Query: 358 INYVVKIIHNIYIYMRSIVFYLYIKYYFL*NNNTMNQKMLEI*PTIHIQADFEINGNNLM 179
INY++ +NI I +Y + YF +NN ++ E FE N +NL
Sbjct: 1839 INYLINSDNNIQIEFTINNNKVYYERYFKRSNNIKSKLQSE---------SFETNKDNLY 1889
Query: 178 GELLVMISYKLYSKK 134
+L + Y+LYSKK
Sbjct: 1890 IQLNSNLEYQLYSKK 1904
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,087,579
Number of Sequences: 1657284
Number of extensions: 7138977
Number of successful extensions: 13884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13854
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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