Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L05
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.14 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.25 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.0  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   5.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.4  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 17/61 (27%), Positives = 24/61 (39%)
 Frame = +3

Query: 3   TRVTQKSNPVTMSKAKLTADVRERYWRSSTAEYASQGFHTPIIYFLLYNLYEIITKSSPI 182
           TR  +  N V   K  + AD+  RY     A Y        +  F + N  EI+   S +
Sbjct: 9   TRTVRLRNRVGKRKGNVVADILSRYPSDGEASYEYPREQPIVAMFEVNNTPEILQLMSDL 68

Query: 183 K 185
           K
Sbjct: 69  K 69


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 111 GFHTPIIYFLLYNLYEIITKSSPIKLL-PLISKSACI*IVGYISSIF*FIV 260
           G + P IYF+   L E     SPI ++ P+I  S C  ++G  S  F F +
Sbjct: 483 GMYRPSIYFISKTLAE-----SPIFIIIPVILTSVCYFMIGLNSQGFRFYI 528


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -3

Query: 421 NNILNGMQL*DNRDIC*SNVKINYVVKIIHNIYIYMRSIVFYLYI 287
           NN+    ++  NRD   +N+  N  V+    + +Y+ + VF  Y+
Sbjct: 112 NNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYILATVFLAYV 156


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -3

Query: 421 NNILNGMQL*DNRDIC*SNVKINYVVKIIHNIYIYMRSIVFYLYI 287
           NN+    ++  NRD   +N+  N  V+    + +Y+ + VF  Y+
Sbjct: 112 NNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYILATVFLAYV 156


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/38 (18%), Positives = 18/38 (47%)
 Frame = +3

Query: 6   RVTQKSNPVTMSKAKLTADVRERYWRSSTAEYASQGFH 119
           + ++K   +T       +  +++ W+  TA+Y   G +
Sbjct: 72  KCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYDPDGIY 109


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 188 IAIDFKVSLYMNSWLYFK 241
           +A D KV  Y NS  YF+
Sbjct: 15  VAADNKVVCYYNSKAYFR 32


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 227 WLYFKHFLIHSV 262
           WL+  HFL H V
Sbjct: 667 WLFHCHFLFHIV 678


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 227 WLYFKHFLIHSV 262
           WL+  HFL H V
Sbjct: 667 WLFHCHFLFHIV 678


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 197  DFKVSLYMNSWLYFK 241
            D+KV  Y  +W +++
Sbjct: 2320 DYKVVCYFTNWAWYR 2334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,730
Number of Sequences: 336
Number of extensions: 2173
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)