Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L04
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   0.55 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   2.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   9.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   9.0  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 187 VAKVIISSWSFEKNFFFSSNINT 119
           V K+++  +  +KNF   SN+ T
Sbjct: 170 VLKILVEKYRHQKNFINESNVET 192


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 64  PSGQLVCGNYDC 99
           P G+L CGN +C
Sbjct: 110 PDGKLSCGNGEC 121


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 64  PSGQLVCGNYDC 99
           P G+L CGN +C
Sbjct: 117 PDGKLSCGNGEC 128


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 64  PSGQLVCGNYDC 99
           P G L CG+ +C
Sbjct: 118 PDGSLACGDGNC 129


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +1

Query: 10  NYGPAGNYIDQSPYKAGKPSGQLVCGN 90
           N  P G     S   +G P G  + GN
Sbjct: 41  NCSPQGASFGSSMLNSGMPGGMAMNGN 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,903
Number of Sequences: 336
Number of extensions: 1657
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)