Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_L04
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42839-2|AAC69015.1|  425|Caenorhabditis elegans Venom-allergen-...    29   1.1  
U42839-1|AAM54195.1|  424|Caenorhabditis elegans Venom-allergen-...    29   1.1  
AF112356-1|AAD27559.1|  425|Caenorhabditis elegans venom allerge...    29   1.1  
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    28   3.4  
U39667-3|AAQ91909.1|  417|Caenorhabditis elegans Xo lethal prote...    27   4.5  
U39667-2|AAQ91910.1|  426|Caenorhabditis elegans Xo lethal prote...    27   4.5  
L35129-3|AAA67048.1|  355|Caenorhabditis elegans xol-1 protein.        27   4.5  
L35129-2|AAA67049.1|  417|Caenorhabditis elegans xol-1 protein.        27   4.5  
L35129-1|AAA67047.1|  426|Caenorhabditis elegans xol-1 protein.        27   4.5  
Z70308-2|CAA94349.1|  212|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>U42839-2|AAC69015.1|  425|Caenorhabditis elegans
           Venom-allergen-like protein protein1, isoform a protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 13  YGPAGNYIDQSPYKAGKP 66
           YGPAGNY++Q  Y  G P
Sbjct: 385 YGPAGNYMNQLIYTKGSP 402


>U42839-1|AAM54195.1|  424|Caenorhabditis elegans
           Venom-allergen-like protein protein1, isoform b protein.
          Length = 424

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 13  YGPAGNYIDQSPYKAGKP 66
           YGPAGNY++Q  Y  G P
Sbjct: 384 YGPAGNYMNQLIYTKGSP 401


>AF112356-1|AAD27559.1|  425|Caenorhabditis elegans venom
           allergen-like protein protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 13  YGPAGNYIDQSPYKAGKP 66
           YGPAGNY++Q  Y  G P
Sbjct: 385 YGPAGNYMNQLIYTKGSP 402


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 250 NIMTTNKNYKINQ*KFRNSLFVAKVIISSWSFEKNFFF 137
           NI   N  Y I + +F N  +++K I++   F+KN FF
Sbjct: 309 NIFKKNY-YHIRKIRFFNFFYISKKILTKKFFKKNLFF 345


>U39667-3|AAQ91909.1|  417|Caenorhabditis elegans Xo lethal protein
           1, isoform b protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 82  ILIVRWVCLLCRETDRCNYQPARSCL 5
           +LI  W C+L  ETD C+ +  +S +
Sbjct: 130 MLIALWKCMLASETDICDQEVLKSIM 155


>U39667-2|AAQ91910.1|  426|Caenorhabditis elegans Xo lethal protein
           1, isoform c protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 82  ILIVRWVCLLCRETDRCNYQPARSCL 5
           +LI  W C+L  ETD C+ +  +S +
Sbjct: 130 MLIALWKCMLASETDICDQEVLKSIM 155


>L35129-3|AAA67048.1|  355|Caenorhabditis elegans xol-1 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 82  ILIVRWVCLLCRETDRCNYQPARSCL 5
           +LI  W C+L  ETD C+ +  +S +
Sbjct: 130 MLIALWKCMLASETDICDQEVLKSIM 155


>L35129-2|AAA67049.1|  417|Caenorhabditis elegans xol-1 protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 82  ILIVRWVCLLCRETDRCNYQPARSCL 5
           +LI  W C+L  ETD C+ +  +S +
Sbjct: 130 MLIALWKCMLASETDICDQEVLKSIM 155


>L35129-1|AAA67047.1|  426|Caenorhabditis elegans xol-1 protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 82  ILIVRWVCLLCRETDRCNYQPARSCL 5
           +LI  W C+L  ETD C+ +  +S +
Sbjct: 130 MLIALWKCMLASETDICDQEVLKSIM 155


>Z70308-2|CAA94349.1|  212|Caenorhabditis elegans Hypothetical
           protein F49E11.5 protein.
          Length = 212

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 13  YGPAGNYIDQSPYKAGK 63
           Y PAGNYI    YK+G+
Sbjct: 177 YSPAGNYIGMDIYKSGE 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,956,410
Number of Sequences: 27780
Number of extensions: 140561
Number of successful extensions: 352
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)