Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K24
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   5.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   6.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   6.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 259 KDDDGRLVFLSASLLRQSTVLSRPKFSSLH 170
           K+ D R  F  ASL+RQS + S  K  +L+
Sbjct: 499 KNADVRPPFTYASLIRQSIIESPDKQLTLN 528


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 318 CHCLEGLHYLSTLYH 274
           C C++G+   S LYH
Sbjct: 609 CRCVKGILLKSGLYH 623


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 315 HCLEGLHYLSTLYH 274
           H +EG HY+  +Y+
Sbjct: 287 HNIEGTHYVKIVYY 300


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 315 HCLEGLHYLSTLYH 274
           H +EG HY+  +Y+
Sbjct: 302 HNIEGTHYVKIVYY 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,071
Number of Sequences: 438
Number of extensions: 1562
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)