Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K23
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    29   0.029
AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    26   0.21 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.36 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   3.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.9  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.8  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   7.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   7.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 0.029
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = +2

Query: 221 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 400
           +P  PA  P+   K   V+ + +R       ++MP ++ W  P    + P+ NS+P++V+
Sbjct: 39  RPLIPATAPQKPDKWEDVMADIER-------VIMPGVTHWHSPRFHAYFPTANSYPAIVA 91


>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
          1-alpha protein.
          Length = 56

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 10 HHEALQEAVPG 42
          HHEAL EAVPG
Sbjct: 46 HHEALPEAVPG 56


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory
          receptor candidate 15 protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 2  HEGTTRLYKKLYPVTMLV 55
          ++  T+LY+KLYPV M +
Sbjct: 24 YDKPTKLYQKLYPVLMFL 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 376  PGRTPHTGAWREP 338
            PG  P T +W++P
Sbjct: 1157 PGHKPSTSSWQKP 1169



 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 83   SLTDTFLTLKPTLSPGTASCRASWCP 6
            ++ D   T KP  S  + S   SW P
Sbjct: 1335 NVVDIVTTAKPAQSTTSVSTTTSWNP 1360


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/41 (19%), Positives = 21/41 (51%)
 Frame = -2

Query: 441 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 319
           ++ D  ++PH+  G    G++  + +  +    N+ + GG+
Sbjct: 313 FWDDEQQVPHIVKGNQWLGFDDPKSIQVKVEFANEKNLGGV 353


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 274 TGKSTEDNPKSIKSGDAAIVNLVPSKPLC 360
           TGK  +    S K  DAA+  +VP K LC
Sbjct: 130 TGKVCDVEMVSCK--DAALRKVVPLKKLC 156


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 344 PPSPCV--WSPSRNSHPSVVSP 403
           PP P +    P  +SHP++V+P
Sbjct: 231 PPHPGLSPHPPHLSSHPAIVTP 252


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 344 PPSPCV--WSPSRNSHPSVVSP 403
           PP P +    P  +SHP++V+P
Sbjct: 123 PPHPGLSPHPPHLSSHPAIVTP 144


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 411 VTHGETTEGWEFLEGLHTQG 352
           VT G   EG+   E LH +G
Sbjct: 36  VTEGWDEEGYHTPESLHYEG 55


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -2

Query: 441 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 319
           ++ D  ++PH+  G    G++  + +  +    N  + GG+
Sbjct: 314 FWDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGV 354


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -2

Query: 441 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 319
           ++ D  ++PH+  G    G++  + +  +    N  + GG+
Sbjct: 314 FWDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGV 354


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 146 KSAAPLGGLFFESP 105
           K+ +P GG  FE+P
Sbjct: 396 KAPSPYGGQMFEAP 409


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 101 LQEIRKTTHPGE 136
           L+E  +TTHP E
Sbjct: 346 LEEYTRTTHPNE 357


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 370 FQEFPPLGRFAVRDMR 417
           +  FPP  R  +RD R
Sbjct: 81  YPRFPPYDRMDIRDRR 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,857
Number of Sequences: 336
Number of extensions: 3208
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)