Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K23
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 255 1e-68
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 255 1e-68
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 255 1e-68
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.00
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 1.3
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 1.3
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.3
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 29 2.3
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 29 2.3
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 29 2.3
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 3.1
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 3.1
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 3.1
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 3.1
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 28 4.0
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 28 4.0
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 28 4.0
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 7.0
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 27 7.0
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 7.0
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 7.0
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 27 9.3
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical... 27 9.3
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 255 bits (624), Expect = 1e-68
Identities = 117/157 (74%), Positives = 132/157 (84%)
Frame = +1
Query: 10 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS 189
HHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQIS
Sbjct: 261 HHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQIS 320
Query: 190 NGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVES 369
NGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVES
Sbjct: 321 NGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVES 380
Query: 370 FQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKV 480
F ++ PLGRFAVRDMRQTVAVGVIK+V + GKV
Sbjct: 381 FTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKV 417
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 255 bits (624), Expect = 1e-68
Identities = 117/157 (74%), Positives = 132/157 (84%)
Frame = +1
Query: 10 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS 189
HHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQIS
Sbjct: 295 HHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQIS 354
Query: 190 NGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVES 369
NGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVES
Sbjct: 355 NGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVES 414
Query: 370 FQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKV 480
F ++ PLGRFAVRDMRQTVAVGVIK+V + GKV
Sbjct: 415 FTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKV 451
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 255 bits (624), Expect = 1e-68
Identities = 117/157 (74%), Positives = 132/157 (84%)
Frame = +1
Query: 10 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS 189
HHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQIS
Sbjct: 295 HHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQIS 354
Query: 190 NGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVES 369
NGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVES
Sbjct: 355 NGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVES 414
Query: 370 FQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKV 480
F ++ PLGRFAVRDMRQTVAVGVIK+V + GKV
Sbjct: 415 FTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKV 451
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 82.2 bits (194), Expect = 2e-16
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +1
Query: 25 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTP 204
+ V GDN+ F +K + EL+ G++ + G F A+V+VL H I++GY+
Sbjct: 392 ERVVAGDNIKFKLKGIEENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYSC 450
Query: 205 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 384
VL +A + +D++TG+ + K +K + I+ L +P +E F+E+P
Sbjct: 451 VLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLESPEPFVLEPFKEYP 508
Query: 385 PLGRFAVRDMRQTVAVG-VIKAV 450
LGRF +RD +T+A+G V+K V
Sbjct: 509 YLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 145 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 324
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 325 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 450
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 145 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 324
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 325 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 450
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.00
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 210 GLPHSPHSLQICRNQRESRPSYW*INR 290
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 269 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 388
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 269 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 388
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 242 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 367
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 28.7 bits (61), Expect = 2.3
Identities = 34/145 (23%), Positives = 61/145 (42%)
Frame = +1
Query: 16 EALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNG 195
+ + +A PGD +G ++ + K++RRG V + + + AQ+ VL
Sbjct: 308 KTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGA 364
Query: 196 YTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQ 375
TP+ + + H+ + V R GK + G++A V L + + +E
Sbjct: 365 KTPIANYFSEHVFSLTWDSGASV-RIIGKD------FVMPGESAEVELSLNSQMFIE--- 414
Query: 376 EFPPLGRFAVRDMRQTVAVGVIKAV 450
P RF +R +T+ GV V
Sbjct: 415 ---PQQRFTIRKGAKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 28.7 bits (61), Expect = 2.3
Identities = 34/145 (23%), Positives = 61/145 (42%)
Frame = +1
Query: 16 EALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNG 195
+ + +A PGD +G ++ + K++RRG V + + + AQ+ VL
Sbjct: 309 KTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGA 365
Query: 196 YTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQ 375
TP+ + + H+ + V R GK + G++A V L + + +E
Sbjct: 366 KTPIANYFSEHVFSLTWDSGASV-RIIGKD------FVMPGESAEVELSLNSQMFIE--- 415
Query: 376 EFPPLGRFAVRDMRQTVAVGVIKAV 450
P RF +R +T+ GV V
Sbjct: 416 ---PQQRFTIRKGAKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 28.7 bits (61), Expect = 2.3
Identities = 34/145 (23%), Positives = 61/145 (42%)
Frame = +1
Query: 16 EALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNG 195
+ + +A PGD +G ++ + K++RRG V + + + AQ+ VL
Sbjct: 309 KTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGA 365
Query: 196 YTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQ 375
TP+ + + H+ + V R GK + G++A V L + + +E
Sbjct: 366 KTPIANYFSEHVFSLTWDSGASV-RIIGKD------FVMPGESAEVELSLNSQMFIE--- 415
Query: 376 EFPPLGRFAVRDMRQTVAVGVIKAV 450
P RF +R +T+ GV V
Sbjct: 416 ---PQQRFTIRKGAKTIGTGVFTDV 437
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 418 ASCHARRNDRGVGIPGRTPHTGAW 347
+SC +NDRG P R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 208 LDCHTAHIACKFAEIKEKVDRRTGKSTE 291
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 208 LDCHTAHIACKFAEIKEKVDRRTGKSTE 291
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 208 LDCHTAHIACKFAEIKEKVDRRTGKSTE 291
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 110 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 15
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 110 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 15
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 110 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 15
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 110 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 15
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 115 KNNPPRGAAD-FTAQVIVLNHP 177
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 115 KNNPPRGAAD-FTAQVIVLNHP 177
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 158 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTAS 27
T A +AAP GGLF + T P T T +P TA+
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAA 511
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 125 HPGELQTSQRKSLC*ITQVKYQTDTHLYWI 214
H G + ++ SLC +T Y+ +LYWI
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWI 340
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 244 AEIKEKVDRRTGKSTEDNPKS 306
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 314 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 400
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 314 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 400
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical protein
C46A5.4 protein.
Length = 1432
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 25 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRG 135
+EA+P N + ++V RR +VAGD ++N G
Sbjct: 983 KEALPQGNQERDCRSVLQNRQRRCFVAGDERSNEQPG 1019
>AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical
protein Y110A2AL.1 protein.
Length = 142
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 88 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQI 186
RR Y D P+GA DF AQ++ PG I
Sbjct: 64 RRHYF--DLHGMTPQGAVDFVAQIVEGRRPGYI 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,976,366
Number of Sequences: 27780
Number of extensions: 313067
Number of successful extensions: 1018
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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