Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K21
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   2.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 102 YIKIFFRKKDKMYVDLFTFQTFI 170
           Y++     + K++VDLF   TF+
Sbjct: 172 YLRSTLSDRYKVFVDLFNLSTFL 194


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 102 YIKIFFRKKDKMYVDLFTFQTFI 170
           Y++     + K++VDLF   TF+
Sbjct: 332 YLRSTLSDRYKVFVDLFNLSTFL 354


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 102 YIKIFFRKKDKMYVDLFTFQTFI 170
           Y++     + K++VDLF   TF+
Sbjct: 332 YLRSTLSDRYKVFVDLFNLSTFL 354


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -3

Query: 341 SVHMIVASVLVRVPKWYIFLFIYLLVC*DLHFKECYLITYY 219
           ++H++   VL+ +   Y F + ++L    L    C    YY
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYY 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,507
Number of Sequences: 336
Number of extensions: 2652
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)