Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K18
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 270 1e-71
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 256 2e-67
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 218 7e-56
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 190 2e-47
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 172 6e-42
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 159 6e-38
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 156 4e-37
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 153 2e-36
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 152 7e-36
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 138 1e-31
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 121 1e-26
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 121 1e-26
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 116 6e-25
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 101 1e-20
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 99 1e-19
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 95 1e-18
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 93 5e-18
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 73 5e-12
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 72 1e-11
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 71 2e-11
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 71 3e-11
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 70 4e-11
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 68 2e-10
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 60 4e-08
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 59 7e-08
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 58 1e-07
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 57 3e-07
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 57 4e-07
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 55 1e-06
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 53 6e-06
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 52 1e-05
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 49 8e-05
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 49 1e-04
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 48 2e-04
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 48 2e-04
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 47 3e-04
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 45 0.001
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 43 0.007
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 42 0.015
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 41 0.020
UniRef50_Q00U98 Cluster: Chromosome 16 contig 1, DNA sequence; n... 35 1.8
UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides im... 33 4.0
UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4; ... 33 5.3
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65; Reov... 33 7.1
UniRef50_A1FFR2 Cluster: General secretion pathway protein GspK ... 32 9.3
UniRef50_Q4D9C8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 270 bits (663), Expect = 1e-71
Identities = 132/201 (65%), Positives = 157/201 (78%), Gaps = 5/201 (2%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++
Sbjct: 69 VSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSV 128
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKTTDG++LRVFCIGFT KD++SQRKTCYAQH+Q++ IR KM II R++TS++L+ VV
Sbjct: 129 DVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVV 188
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S LM
Sbjct: 189 EKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTG 248
Query: 70 KS-----ERPEGYEPPVQESV 23
+ +RPEGYEPPVQ SV
Sbjct: 249 AASGVVVDRPEGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 256 bits (628), Expect = 2e-67
Identities = 128/199 (64%), Positives = 151/199 (75%), Gaps = 3/199 (1%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+ MVKKWQT+IEA++
Sbjct: 69 VSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 125
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKTTDGY+LR+FC+GFT K RKT YAQH QVR IRKKM EI+TR+V +++L+EVV
Sbjct: 126 DVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVV 185
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM +
Sbjct: 186 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDE 245
Query: 70 ---KSERPEGYEPPVQESV 23
K ER +GYEPPVQESV
Sbjct: 246 TGAKVERADGYEPPVQESV 264
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 218 bits (533), Expect = 7e-56
Identities = 104/164 (63%), Positives = 130/164 (79%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
+SLADLQAD D +++RK RL AEDVQGRNVL NF GMD TTDKLR +V+KWQTLIEA++
Sbjct: 463 ISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 520
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI+T TS +L+E+V
Sbjct: 521 DVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELV 580
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 119
K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLM
Sbjct: 581 KKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLM 624
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 190 bits (463), Expect = 2e-47
Identities = 90/164 (54%), Positives = 125/164 (76%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D D +FRK +L ++VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+
Sbjct: 68 VSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANV 125
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII R+ ++ L+++
Sbjct: 126 TVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLT 185
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 119
NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+
Sbjct: 186 NKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLL 229
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 172 bits (418), Expect = 6e-42
Identities = 86/181 (47%), Positives = 117/181 (64%)
Frame = -3
Query: 565 FRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 386
FRKF+L EDVQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 385 GFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKA 206
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 205 CHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGDKSERPEGYEPPVQES 26
I+PL +RKVKVLK+P+ ++ +++ G+ RP+ YEPPV ++
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKLDLGRIL---ELHSEGKADEFGEGVPRPDHYEPPVVDA 182
Query: 25 V 23
V
Sbjct: 183 V 183
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 159 bits (385), Expect = 6e-38
Identities = 87/177 (49%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLAD++ D + FRK +L AE+V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +
Sbjct: 67 VSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFV 124
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I+T V+S++L+ VV
Sbjct: 125 DVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVV 184
Query: 250 NKLI--------------PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 122
+ LI ++A+ I I+P+ +V IRKVKVLK P+ + +KL
Sbjct: 185 DYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKL 241
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 156 bits (378), Expect = 4e-37
Identities = 74/165 (44%), Positives = 112/165 (67%), Gaps = 3/165 (1%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
+LADL+ D+ ++++RK +L+ ++V GRN +F+G+D+T D+L M++KWQTLIEA +D
Sbjct: 71 TLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVD 129
Query: 427 VKTTDGYVLRVFCIGFTNKDTL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELRE 257
KT DGY++RVF + FT K + S TCYA+ +QVRAIR+K+ IT + + E
Sbjct: 130 CKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAE 189
Query: 256 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 122
LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+
Sbjct: 190 FSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKI 234
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 153 bits (372), Expect = 2e-36
Identities = 91/196 (46%), Positives = 123/196 (62%), Gaps = 1/196 (0%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
SLA LQ D RKF+LI ED++G+N L N +GMDLT DK V KWQ ++EA+ D
Sbjct: 55 SLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHAD 110
Query: 427 VKTTDGYVLRVFCIGFT-NKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
VKT D Y+L +FC+G+T N T R+ AQ+ QV I +I+ D ++L+EV+
Sbjct: 111 VKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVL 168
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL
Sbjct: 169 NKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKL----PELHALGLHGSHR 224
Query: 70 KSERPEGYEPPVQESV 23
KS+R YEPPVQESV
Sbjct: 225 KSDR---YEPPVQESV 237
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 152 bits (368), Expect = 7e-36
Identities = 71/162 (43%), Positives = 112/162 (69%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
SLADLQ SD + ++RK +LI +DV+G +F+G+D T DK+ M+KK QTLIE ++
Sbjct: 67 SLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVE 125
Query: 427 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVN 248
++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++
Sbjct: 126 ARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLG 185
Query: 247 KLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 122
+S+AK+I KA I+PL+++ +RKVK++KRP+ + KL
Sbjct: 186 FFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVDAQKL 227
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 138 bits (334), Expect = 1e-31
Identities = 59/163 (36%), Positives = 106/163 (65%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
+LADL + E ++RK R ++VQGRN+L FH M++TTDK+ +++KW T +E ++
Sbjct: 70 NLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVE 129
Query: 427 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVN 248
VKT DGY +R+F + FT Q + CYA+ V+ +R ++ ++I R ++ +++E V+
Sbjct: 130 VKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVS 189
Query: 247 KLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 119
L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+
Sbjct: 190 LLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALL 232
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 121 bits (292), Expect = 1e-26
Identities = 61/132 (46%), Positives = 88/132 (66%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
V+LADL + KF+ EDV G++ L FHG+ LTTDKLR +VKKW TLIE ++
Sbjct: 70 VNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSV 127
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKTTDG+++R+FCIGFT++ + +KT YA+ Q++ IRK M +IT++ S EL + V
Sbjct: 128 DVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFV 187
Query: 250 NKLIPDSIAKDI 215
+ L + K +
Sbjct: 188 DYLKKTNFQKKL 199
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 121 bits (292), Expect = 1e-26
Identities = 59/154 (38%), Positives = 96/154 (62%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
V+ ADL ++D RKF D++G + F GM+LT+DK + M+KKW TLIEA
Sbjct: 20 VNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQK 77
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ ++++++
Sbjct: 78 DIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIM 137
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 149
KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 138 KKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 116 bits (278), Expect = 6e-25
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
Frame = -3
Query: 316 IRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 137
IRKKM EI+TR+V +++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 136 EISKLMXXXXXXXXXXXXXXGD---KSERPEGYEPPVQESV 23
E+ KLM + K ER +GYE PVQESV
Sbjct: 171 ELGKLMELHGEGCSSGKATGDETGVKVERADGYELPVQESV 211
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D E +FRKF+LI EDVQG+N L NFHG+DLT+DK+ ++K I
Sbjct: 66 VSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR- 121
Query: 430 DVKTTD 413
+V+T D
Sbjct: 122 EVQTND 127
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 101 bits (243), Expect = 1e-20
Identities = 52/154 (33%), Positives = 88/154 (57%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLAD+ E S F + + FHG+ LT DK+ ++KKW TLIE +
Sbjct: 64 VSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEV 121
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++ + ++++ +
Sbjct: 122 NFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFI 181
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 149
+++ I + IE C I+P+ V IRK+KV++
Sbjct: 182 HRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 98.7 bits (235), Expect = 1e-19
Identities = 55/157 (35%), Positives = 84/157 (53%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
V+L DL ++ KF L + V L NFHGMD+T K + +K I+ +
Sbjct: 66 VNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFM 125
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E + ++ + +V
Sbjct: 126 DIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLV 185
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 140
KL + + +A I RDV IR+VKV+KRPR
Sbjct: 186 TKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPR 222
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 95.1 bits (226), Expect = 1e-18
Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = -3
Query: 610 VSLADLQAD-SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 434
+S AD+ D S A R F +R IA G V F GM LT DKL +++K++T+I+A+
Sbjct: 65 LSHADMVNDLSHAYRLF-SWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDAS 120
Query: 433 IDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREV 254
+D KT DG++LR+F IGFT K S + YA + R +R M + +T ++ + ++
Sbjct: 121 VDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQL 180
Query: 253 VNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 143
+ + I +I + C I + V I KVKV+K P
Sbjct: 181 CKDFVDEKIENEIVEKCKQICQIESVYITKVKVIKAP 217
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 93.1 bits (221), Expect = 5e-18
Identities = 47/79 (59%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -3
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM +
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 70 ---KSERPEGYEPPVQESV 23
K ER EGYEPPVQESV
Sbjct: 61 TGAKVERAEGYEPPVQESV 79
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 72.9 bits (171), Expect = 5e-12
Identities = 46/139 (33%), Positives = 74/139 (53%)
Frame = -3
Query: 535 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQ 356
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 355 RKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 176
KT IRKK+ E +T + E V +I D +++ K IYP+R +
Sbjct: 137 IKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRI 187
Query: 175 CIRKVKVLKRPRFEISKLM 119
IRK +VL P +I +L+
Sbjct: 188 EIRKSEVLHFPEEKIVELV 206
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 71.7 bits (168), Expect = 1e-11
Identities = 48/156 (30%), Positives = 80/156 (51%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSL D+ D KF++ V+G L F G++LT D +R +V+K + + A
Sbjct: 59 VSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAIT 116
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+VKT DG V+R+ +G T + +K+ A+RKKM E + + + + +
Sbjct: 117 EVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQFL 167
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 143
+++ ++A D+ I P+R V I K+KVLK P
Sbjct: 168 KEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 70.9 bits (166), Expect = 2e-11
Identities = 48/161 (29%), Positives = 83/161 (51%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
+L D+ D + FR+ E++ G + +F G +LT D +R +VK+ + I+AN+
Sbjct: 50 TLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVV 107
Query: 427 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVN 248
V T DG+ +RV I T K A+ +Q+ +IR+ M ++ + E +N
Sbjct: 108 VTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFIN 158
Query: 247 KLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 125
+++ +A +I K IYPLR V I K +++ RP +K
Sbjct: 159 EVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRPAVAAAK 199
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 70.5 bits (165), Expect = 3e-11
Identities = 47/147 (31%), Positives = 79/147 (53%)
Frame = -3
Query: 583 SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 404
+D ++ K L +V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V
Sbjct: 57 NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFV 116
Query: 403 LRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIA 224
+RV FT K A+ +Q++AIR+ M +I+ + + ++ + + I ++
Sbjct: 117 IRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLS 167
Query: 223 KDIEKACHGIYPLRDVCIRKVKVLKRP 143
I + IYPLR V IRK +V P
Sbjct: 168 AAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 70.1 bits (164), Expect = 4e-11
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = -3
Query: 538 DVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLS 359
DV+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 65 DVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------ 118
Query: 358 QRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI----PDSIAKDIEKACHGIY 191
T A+ +Q RAIRK+M ++I + + E + + + +SI + I++A IY
Sbjct: 119 ---TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIY 175
Query: 190 PLRDVCIRKVKVLKRP 143
P+R IRK +VL+ P
Sbjct: 176 PIRQAEIRKTEVLEEP 191
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/155 (30%), Positives = 77/155 (49%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
+LA+L D + +++K V G N F +LT + L + ++ + IE +D
Sbjct: 52 TLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVD 111
Query: 427 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVN 248
V T DGY LRV + F T+ + KT +Q RAIR M +I+ +S + +
Sbjct: 112 VTTADGYKLRVKSVVF----TVRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQ 162
Query: 247 KLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 143
+ + + +I K IYP+R V IRK+++L P
Sbjct: 163 ECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 60.1 bits (139), Expect = 4e-08
Identities = 45/160 (28%), Positives = 82/160 (51%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VS D+ D KF+++ D L M++T D +R +V++ + ++A +
Sbjct: 48 VSFYDITKDVSQLHIKLKFQIVKVD--DGIALTQLKLMEMTRDYIRSLVRRGTSRVDAIL 105
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DV+T DG +RV + T +S+ KT +Q +AIR+ M +II+ S + +
Sbjct: 106 DVQTKDGVKMRVMALAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLDFDTFI 156
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 131
+ + ++A +++ IYP++ V + K+KVL P EI
Sbjct: 157 QQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL-TPTTEI 195
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 59.3 bits (137), Expect = 7e-08
Identities = 45/155 (29%), Positives = 73/155 (47%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
+L +L DS A + F++ DV F +LT D LR +V++ + +EA+I
Sbjct: 48 TLGELTGDSGANNTKLTFKIT--DVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASIT 105
Query: 427 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVN 248
V TTD Y +RV + T K A +Q +AIR+ M + + V+
Sbjct: 106 VLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVD 156
Query: 247 KLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 143
++ +++ I IYPLR V I+K+ + RP
Sbjct: 157 AIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 58.4 bits (135), Expect = 1e-07
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Frame = -3
Query: 535 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQ 356
V+G F G +L D +R + ++ + + +V T DGY LRV + FT
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT------- 122
Query: 355 RKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLI----PDSIAKDIEKACHGIYP 188
R+ C + +Q AIRK M EI+ + S L E++ ++ S+A I+++ IYP
Sbjct: 123 RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYP 180
Query: 187 LRDVCIRKVKVLKRP 143
LR V I K K+L P
Sbjct: 181 LRKVEIAKSKLLWVP 195
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 57.2 bits (132), Expect = 3e-07
Identities = 43/140 (30%), Positives = 62/140 (44%)
Frame = -3
Query: 559 KFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 380
K R V L F+GM+LT D +R +V++ + + DV T DG LR+ +
Sbjct: 70 KLRFRVNGVDDGRALTQFNGMELTRDYVRNLVRRGSSKVMVIKDVTTKDGGKLRMEVLAI 129
Query: 379 TNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACH 200
T T T IRK + + + + S+ +V I I D+
Sbjct: 130 T---------TYRCTRTHKHLIRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAK 180
Query: 199 GIYPLRDVCIRKVKVLKRPR 140
IYPLR V I K+KVL+ PR
Sbjct: 181 KIYPLRKVEIIKIKVLEYPR 200
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/147 (25%), Positives = 68/147 (46%)
Frame = -3
Query: 583 SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 404
+DA + K +V + F +LT D LR +V++ + +EA I V TTD Y
Sbjct: 54 NDASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYR 113
Query: 403 LRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIA 224
+++ + T K A +Q +AIR+ M +++ ++++ ++ ++
Sbjct: 114 VQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLS 164
Query: 223 KDIEKACHGIYPLRDVCIRKVKVLKRP 143
I IYPLR V I+K + RP
Sbjct: 165 SAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 55.2 bits (127), Expect = 1e-06
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Frame = -3
Query: 607 SLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 428
+L DL D F+++ + G + F G +L+ D +R +V++ + I +D
Sbjct: 56 TLYDLTGDFSTVYVHLYFKVVRNE--GERLFTEFAGHELSRDYVRSLVRRKSSKINKVVD 113
Query: 427 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTSSELREVV 251
+ T DG+ LRV TL+ T Y H Q IRK M +++ + E V
Sbjct: 114 ITTKDGFTLRV--------KTLA--LTAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFV 163
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 125
++I ++A +I I PLR I K KVL P + K
Sbjct: 164 QEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFAPLIKEGK 205
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 52.8 bits (121), Expect = 6e-06
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = -3
Query: 184 RDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD---KSERPEGYEPPVQESV 23
R +C++KVK+LK+P+FE+ KLM + K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 52.0 bits (119), Expect = 1e-05
Identities = 40/154 (25%), Positives = 71/154 (46%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
+SL DL + + F++ + V G N F G D T + L+ V++ ++ I A +
Sbjct: 56 ISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIV 113
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+V+T DG+ +RV + T KT IR +M +II + E V
Sbjct: 114 EVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFV 164
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 149
+ ++ + I C ++PL+ V I K +V++
Sbjct: 165 HAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIE 198
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 49.2 bits (112), Expect = 8e-05
Identities = 35/147 (23%), Positives = 68/147 (46%)
Frame = -3
Query: 592 QADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 413
+ D + + K R ++V G F G TTD +R M+++ + I+A+ VKT D
Sbjct: 55 ELSGDFSKQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKD 114
Query: 412 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPD 233
+++ + T T A+ +Q + +R+ + +++ E++ ++
Sbjct: 115 DRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNG 165
Query: 232 SIAKDIEKACHGIYPLRDVCIRKVKVL 152
+A ++ IYPL+ V I K KVL
Sbjct: 166 KLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/137 (27%), Positives = 70/137 (51%)
Frame = -3
Query: 559 KFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 380
+FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY++R+ +
Sbjct: 78 RFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLII 135
Query: 379 TNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACH 200
T K + K ++IR K +++ V + + ++ S+ +I+
Sbjct: 136 TQKRVQTSVK---------QSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQIK 186
Query: 199 GIYPLRDVCIRKVKVLK 149
IYP R V IRK ++L+
Sbjct: 187 TIYPCRSVVIRKSQLLQ 203
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD 482
+SLADLQ D E +FRKF+LI EDVQG+ L NF M L+ D
Sbjct: 69 MSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 47.6 bits (108), Expect = 2e-04
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Frame = -3
Query: 583 SDAERSFRKFRLIA----EDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 416
SD +FRK + ++ G+ F G ++ D +R MV++ + I+ + KT
Sbjct: 53 SDFTGNFRKSSTMVIFRVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTK 112
Query: 415 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIP 236
DGY L V I + L+ K +R K+ I S L E+ +I
Sbjct: 113 DGYRL-VIKIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIG 163
Query: 235 DSIAKDIEKACHGIYPLRDVCIRKVKVLKR 146
D++ DI +YP++ + IRK +VL R
Sbjct: 164 DNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 47.2 bits (107), Expect = 3e-04
Identities = 38/143 (26%), Positives = 63/143 (44%)
Frame = -3
Query: 583 SDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 404
+D + K +V G F G ++T D LR +VK+ + I+ ++ V T D
Sbjct: 58 NDYAKQHIKMSFKIAEVTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKK 117
Query: 403 LRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIA 224
+R+ T+S A Q A+R + + + +L +VN ++ I+
Sbjct: 118 VRL---------TISCYTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEIS 168
Query: 223 KDIEKACHGIYPLRDVCIRKVKV 155
KD+ K +YP R V I K KV
Sbjct: 169 KDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 45.2 bits (102), Expect = 0.001
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSL +L D + F+++ +V G F+G ++T + +R MVKK + +++ I
Sbjct: 52 VSLGELIQDYSKQNVRASFKIM--NVAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTI 109
Query: 430 DVKTTDG-YVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREV 254
V L+V FT +A+ +QV+ +R KM +++ ++
Sbjct: 110 TVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESF 160
Query: 253 VNKLIPDSIAKDIEKACHGIYPLRDVCIRK 164
V+ ++ ++K + C I+P+R + I K
Sbjct: 161 VSAMLKGELSKKMFAECKPIFPVRRIEIIK 190
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 42.7 bits (96), Expect = 0.007
Identities = 38/153 (24%), Positives = 68/153 (44%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
V +++L + FR+ + +G F G + D +R +V++ + I+
Sbjct: 51 VPISELTGNFKKSNEKALFRIT--NCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIE 108
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKT+D ++ V + T+ + +K IRK + + I S E V
Sbjct: 109 DVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFV 159
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 152
LI D I D+ A IYPL+ + +RK +++
Sbjct: 160 RYLIGDDIYNDMISATKDIYPLKKIEVRKSELV 192
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 41.5 bits (93), Expect = 0.015
Identities = 34/163 (20%), Positives = 73/163 (44%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
V+L D+ + +++ + I + V + F + + + LR +V++ + + +
Sbjct: 49 VTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIV 107
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
DVKT+DGYV R+ + T + + +K A+R + ++I V + + V
Sbjct: 108 DVKTSDGYVFRLKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQMNIDQFV 158
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 122
I DI + +R + + KVK+++ +I+ L
Sbjct: 159 QAACYGKINSDILSRAKKLVKVRHMGLEKVKLVRTAEEQITLL 201
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 41.1 bits (92), Expect = 0.020
Identities = 31/151 (20%), Positives = 68/151 (45%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSL++L +D ++ +L + + F+G L+ D + MV K L+E +I
Sbjct: 66 VSLSELI--NDYSSYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSI 123
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+ T V+ +F + +T L Y + +++R I ++ I + + + + +
Sbjct: 124 KINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIY 182
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 158
D I I++ + P+++ I ++K
Sbjct: 183 KICCSDVIGNSIKRRSKRVIPIKNFIISRIK 213
>UniRef50_Q00U98 Cluster: Chromosome 16 contig 1, DNA sequence; n=2;
Ostreococcus tauri|Rep: Chromosome 16 contig 1, DNA
sequence - Ostreococcus tauri
Length = 537
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 7 GLFYFRRSPEPVVRNPLAFLTCLQPLPVYRCRLHRAAPSAWRFQNAAS 150
G+ R P P+VR +L+ LQ LP + C LHR S + + +AS
Sbjct: 401 GVLALEREPVPIVRERKRWLSMLQRLPRWEC-LHRRTRSECKLRRSAS 447
>UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 628
Score = 33.5 bits (73), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 390 QKTRRTYPSVVL--TSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRP 530
QK RRTYP + T + +IS H + + R +PW+L TLRP
Sbjct: 505 QKERRTYPVQISLDTRQIPNISTRHIVSFVHWDAENRRVPWRLAETLRP 553
>UniRef50_Q81B91 Cluster: Putative uncharacterized protein; n=4;
Bacillus cereus group|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ATCC 14579 / DSM 31)
Length = 151
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = -3
Query: 586 DSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTD-KLRWMVKKWQ-------TLIEANI 431
D ER F+ ++I+ED++ +LC + D+ T+ KL + K + LI N
Sbjct: 71 DVSPERMFQVLQIISEDIERIEMLCKEYEKDMPTEMKLIYDTKSGKFKAEYEYDLIHTND 130
Query: 430 DVKTTDGY 407
D+KT D +
Sbjct: 131 DIKTADDF 138
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.1 bits (72), Expect = 5.3
Identities = 27/106 (25%), Positives = 51/106 (48%)
Frame = -3
Query: 532 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQR 353
Q ++ CN G+D+ D+++ V + +ID D VF G D L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 352 KTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDI 215
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65;
Reoviridae|Rep: Minor core protein lambda-3 - Reovirus
type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus
2)
Length = 1267
Score = 32.7 bits (71), Expect = 7.1
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -3
Query: 439 ANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELR 260
+ +DV D +LR+ +G K +Q Q ++ A+ K I+ +DV + +L
Sbjct: 1117 SGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGK---IMLQDVNTVQLA 1173
Query: 259 EVVNKLIPDS 230
VVN +PD+
Sbjct: 1174 RVVNLAVPDT 1183
>UniRef50_A1FFR2 Cluster: General secretion pathway protein GspK
precursor; n=1; Pseudomonas putida W619|Rep: General
secretion pathway protein GspK precursor - Pseudomonas
putida W619
Length = 237
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 326 LGMLSVACLALAERILVGETDAENT*DISVSGLNVNVGFNQCLPFLYHPSE---FISGEV 496
+G+LSV LA + + + A + + +GL GFN + +L + G+V
Sbjct: 16 VGLLSVLLGGLAVSVQLQQRQARWQGNQTQAGLAAQAGFNLAVAYLLRDGQARWLADGQV 75
Query: 497 HAVEIAENITSLDILSDKSEL 559
H + A + + ++S++ +L
Sbjct: 76 HVADFAGSTLHISVVSERGKL 96
>UniRef50_Q4D9C8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 344
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 226 RWSQESACSRLHEALNWSHR 285
RW S+ SR+H AL+WSHR
Sbjct: 67 RWQGRSSESRVHRALSWSHR 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,144,827
Number of Sequences: 1657284
Number of extensions: 11726543
Number of successful extensions: 30926
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 30116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30894
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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