Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K18
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   269   4e-74
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           31   0.029
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        31   0.029
DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor...    23   7.8  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  269 bits (660), Expect = 4e-74
 Identities = 131/201 (65%), Positives = 155/201 (77%), Gaps = 5/201 (2%)
 Frame = -3

Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
           VSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++
Sbjct: 69  VSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSV 128

Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
           DVKTTDG++LRVFCIGFT KD++SQRKTCYAQH+Q++ IR KM  II R++TS++L+ VV
Sbjct: 129 DVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVV 188

Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
            KL+PDSIAKDIEKAC  +YPL DV IRKVKVLK+PRF++S LM                
Sbjct: 189 EKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTG 248

Query: 70  KSE-----RPEGYEPPVQESV 23
            +      RPEGYEPPVQ SV
Sbjct: 249 AASGVVVVRPEGYEPPVQASV 269


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 31.1 bits (67), Expect = 0.029
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -3

Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 449
           V+LA+L A SD             D+QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 31.1 bits (67), Expect = 0.029
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -3

Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 449
           V+LA+L A SD             D+QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 384 PMQKTRRTYPSVVLTSMLASISVC 455
           P ++TRR Y  V++   L ++++C
Sbjct: 37  PDRRTRRWYVKVLIAVNLITLAIC 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,468
Number of Sequences: 2352
Number of extensions: 12240
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)