Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K18
(612 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 272 2e-73
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 272 2e-73
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 272 2e-73
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 246 1e-65
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 206 2e-53
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 188 5e-48
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 32 0.70
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 272 bits (667), Expect = 2e-73
Identities = 134/200 (67%), Positives = 154/200 (77%), Gaps = 4/200 (2%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA +
Sbjct: 69 VSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++V
Sbjct: 129 EAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLV 188
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
NKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 189 NKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVS 248
Query: 70 KS----ERPEGYEPPVQESV 23
+RPEGYEPPVQE+V
Sbjct: 249 SEGAVIDRPEGYEPPVQEAV 268
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 272 bits (667), Expect = 2e-73
Identities = 134/200 (67%), Positives = 154/200 (77%), Gaps = 4/200 (2%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA +
Sbjct: 19 VSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 78
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++V
Sbjct: 79 EAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLV 138
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
NKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 139 NKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVS 198
Query: 70 KS----ERPEGYEPPVQESV 23
+RPEGYEPPVQE+V
Sbjct: 199 SEGAVIDRPEGYEPPVQEAV 218
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 272 bits (667), Expect = 2e-73
Identities = 134/200 (67%), Positives = 154/200 (77%), Gaps = 4/200 (2%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA +
Sbjct: 69 VSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++V
Sbjct: 129 EAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLV 188
Query: 250 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXGD 71
NKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 189 NKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVS 248
Query: 70 KS----ERPEGYEPPVQESV 23
+RPEGYEPPVQE+V
Sbjct: 249 SEGAVIDRPEGYEPPVQEAV 268
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 246 bits (603), Expect = 1e-65
Identities = 127/202 (62%), Positives = 147/202 (72%), Gaps = 6/202 (2%)
Frame = -3
Query: 610 VSLA-DLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 434
VSL DLQ D D E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA
Sbjct: 69 VSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAI 128
Query: 433 IDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTSSELRE 257
++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L++
Sbjct: 129 VEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQ 188
Query: 256 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXX 77
+VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 189 LVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAV 248
Query: 76 GDKSERPEG----YEPPVQESV 23
P+ +PPVQESV
Sbjct: 249 VSSEGAPKSTALKVKPPVQESV 270
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 206 bits (502), Expect = 2e-53
Identities = 101/163 (61%), Positives = 121/163 (74%), Gaps = 4/163 (2%)
Frame = -3
Query: 499 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVR 320
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 319 AIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 140
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 139 FEISKLMXXXXXXXXXXXXXXGDKS----ERPEGYEPPVQESV 23
F++SKL+ +RPEGYEPPVQE+V
Sbjct: 121 FDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 163
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 188 bits (458), Expect = 5e-48
Identities = 88/120 (73%), Positives = 102/120 (85%)
Frame = -3
Query: 610 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANI 431
VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA +
Sbjct: 69 VSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128
Query: 430 DVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 251
+ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 129 EAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 170 NADITKWVDTVTRLFDILSDGVRNQLVHDFTKL*TGHIARDDFTHFFPDC 319
+A++T +T L D++S GV L+H FT++ T + + DC
Sbjct: 265 SANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,155,489
Number of Sequences: 53049
Number of extensions: 552544
Number of successful extensions: 1416
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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