Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K17
(346 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele... 130 8e-30
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom... 121 3e-27
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar... 116 8e-26
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung... 111 3e-24
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ... 108 2e-23
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary... 104 5e-22
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote... 100 1e-20
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt... 66 2e-19
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma... 87 8e-17
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M... 79 3e-14
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ... 75 2e-13
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe... 69 3e-11
UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4; Archae... 65 3e-10
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa... 63 1e-09
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya... 63 1e-09
UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila ... 61 6e-09
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre... 60 1e-08
UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12; Archa... 58 4e-08
UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga... 58 5e-08
UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.060
UniRef50_Q38B22 Cluster: Putative uncharacterized protein; n=1; ... 32 2.3
UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3; Thermop... 32 2.3
UniRef50_Q9Z746 Cluster: Flagellar M-Ring Protein; n=4; Chlamydo... 32 3.0
UniRef50_Q91F97 Cluster: 428L; n=1; Invertebrate iridescent viru... 31 4.0
UniRef50_Q3TYB3 Cluster: Visual cortex cDNA, RIKEN full-length e... 31 4.0
UniRef50_Q55IZ8 Cluster: Putative uncharacterized protein; n=1; ... 31 4.0
UniRef50_Q5NNC1 Cluster: Amidophosphoribosyltransferase; n=2; Zy... 31 5.3
UniRef50_A2ZIS5 Cluster: Putative uncharacterized protein; n=2; ... 31 5.3
UniRef50_Q9TZK7 Cluster: Putative uncharacterized protein; n=3; ... 31 5.3
UniRef50_Q4RRM6 Cluster: Chromosome 16 SCAF15002, whole genome s... 31 6.9
UniRef50_Q3VZK4 Cluster: UvrD/REP helicase:HRDC domain; n=1; Fra... 31 6.9
UniRef50_Q22LU3 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_A7ATD9 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q2M0M7 Cluster: GA10477-PA; n=1; Drosophila pseudoobscu... 30 9.2
UniRef50_A2BLL7 Cluster: Conserved archaeal protein; n=1; Hypert... 30 9.2
>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
sapiens (Human)
Length = 97
Score = 130 bits (313), Expect = 8e-30
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 190
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 191 XXXMRHLKIVRRRFRNGFKEGKL-TPKKAVASS 286
MRHLKIV RRFR+GF+EG PK+A ++
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAA 93
>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L37 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 158
Score = 121 bits (292), Expect = 3e-27
Identities = 56/86 (65%), Positives = 63/86 (73%)
Frame = +2
Query: 17 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 196
KGTSSFGKR NK+HTLCRRCGR S+HIQKS CA CGYP+AK+R Y+WS KA
Sbjct: 69 KGTSSFGKRHNKSHTLCRRCGRRSFHIQKSTCANCGYPSAKVRKYNWSEKAKRRKTTGTG 128
Query: 197 XMRHLKIVRRRFRNGFKEGKLTPKKA 274
M HLK V RRF+NGF+ G TPK A
Sbjct: 129 RMSHLKDVHRRFKNGFQVG--TPKGA 152
>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 95
Score = 116 bits (280), Expect = 8e-26
Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 190
M KGT SFGKRRNK+HTLC RCGR S+HIQKS+C+ C YPAA+ R+Y+WSVKA
Sbjct: 1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60
Query: 191 XXXMRHLKIVRRRFRNGFKEG-KLTPK-KAVASS 286
MR+L+ V RRF+ F+EG + TP+ KA ASS
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94
>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 88
Score = 111 bits (267), Expect = 3e-24
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 190
M KGT SFGKR NK+HTLC RCGR S+H+QK C+ CGYP+AK RS++W+ KA
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTG 60
Query: 191 XXXMRHLKIVRRRFRNGFKEG 253
MR+LK V RRF+NGF+ G
Sbjct: 61 TGRMRYLKHVSRRFKNGFQTG 81
>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L37 - Canis familiaris
Length = 124
Score = 108 bits (260), Expect = 2e-23
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +2
Query: 17 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 196
KGTSSFGKRRNK HTLCRRCG +YH+QKS C +C YPA R Y+W KA
Sbjct: 30 KGTSSFGKRRNKMHTLCRRCGSKAYHLQKSTCGKCRYPAKWKRKYNWGAKAKRRNTTGTG 89
Query: 197 XMRHLKIVRRRFRNGFKEGKL-TPKKAVASS 286
MRHLKIV R R+GF+ G PK+A ++
Sbjct: 90 RMRHLKIVYHRCRHGFRGGTTPKPKRAAVAA 120
>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
Eukaryota|Rep: 60S ribosomal protein L37 -
Caenorhabditis elegans
Length = 91
Score = 104 bits (249), Expect = 5e-22
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 190
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 191 XXXMRHLKIVRRRFRNGFKEGKLTPK 268
RHL+ V RFRNGF+ TPK
Sbjct: 61 TGRTRHLRDVNARFRNGFR--GTTPK 84
>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
n=5; Eukaryota|Rep: Ribosomal protein L37e containing
protein - Tetrahymena thermophila SB210
Length = 214
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 EEMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYH-WSVKAXXXX 181
+ T+GT +FGKR KTHTLCRRCG+++YH QK +CA CGYP AK+R Y W K
Sbjct: 45 QSKTRGTPAFGKRHQKTHTLCRRCGKATYHKQKLRCAACGYPDAKMRRYDGWGQKVRDRK 104
Query: 182 XXXXXXMRHLKIVRRRFRNGFKEG 253
MR++K + RR +NGF+ G
Sbjct: 105 GQGTGRMRYMKTIARRAKNGFRSG 128
>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
cytosolic; n=1; Neurospora crassa|Rep: Probable
ribosomal protein L37.e.A, cytosolic - Neurospora crassa
Length = 124
Score = 66.1 bits (154), Expect(2) = 2e-19
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +2
Query: 68 RRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFK 247
R R S H QK CA CGYPAAK R Y+WS KA +R+L V R+F+NGF+
Sbjct: 52 RFTSRRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQ 111
Query: 248 EG 253
G
Sbjct: 112 TG 113
Score = 50.4 bits (115), Expect(2) = 2e-19
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGR 82
MTKGTSSFGKR KTH LCRRCGR
Sbjct: 1 MTKGTSSFGKRHTKTHGLCRRCGR 24
>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
maydis|Rep: Ribosomal protein L37 - Ustilago maydis
(Smut fungus)
Length = 125
Score = 87.0 bits (206), Expect = 8e-17
Identities = 39/75 (52%), Positives = 46/75 (61%)
Frame = +2
Query: 50 KTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRR 229
KTHT+CRRC ++H QK CA CGYPAAK+RSY W KA MR+LK V RR
Sbjct: 50 KTHTVCRRCNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRR 109
Query: 230 FRNGFKEGKLTPKKA 274
+NGF+ G K A
Sbjct: 110 AKNGFQTGSAGKKVA 124
>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
Encephalitozoon cuniculi
Length = 90
Score = 78.6 bits (185), Expect = 3e-14
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 190
M+KGT+SFGK+ + +CRRCGR SYH QK+ C+ CGYP K+R+ S+KA
Sbjct: 1 MSKGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRN-PGSIKARRRRTIG 59
Query: 191 XXXMRHLKIVRRRFRNGFK 247
MR++K R +NG K
Sbjct: 60 TGRMRYMKRELRAAKNGHK 78
>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 103
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQ 118
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
grisea 70-15
Length = 188
Score = 68.5 bits (160), Expect = 3e-11
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = +2
Query: 71 RCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKE 250
+ R S H+QK CA CGYPAAK R Y+WS KA MR+L V R+F+N F+
Sbjct: 115 KMSRRSLHVQKHTCASCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQT 174
Query: 251 GKLTPK 268
G TPK
Sbjct: 175 G--TPK 178
>UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4;
Archaea|Rep: 50S ribosomal protein L37e - Thermoplasma
volcanium
Length = 54
Score = 64.9 bits (151), Expect = 3e-10
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 11 MTKGTSSFGKRRNK-THTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWS 160
M+ GT+ GK NK TH CRRCG +Y+++ +C+ CG+PA ++RSY W+
Sbjct: 1 MSNGTAVMGKINNKKTHITCRRCGHHTYNVRTKRCSHCGFPAPRIRSYKWA 51
>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
furiosus
Length = 62
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 11 MTKGTSSFGKRRNK-THTLCRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 166
M GT++FGKR + TH CRRCGR SY+++K CA CG+ + +LR Y WS K
Sbjct: 1 MGSGTATFGKRNSTPTHIRCRRCGRVSYNVKKGYCAACGFGRSRRLRKYRWSKK 54
>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L37e -
Halobacterium salinarium (Halobacterium halobium)
Length = 58
Score = 62.9 bits (146), Expect = 1e-09
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 20 GTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA-AKLRSYHWSVK 166
GT S GK+ THT CRRCG SYH +K C+ CG+ A AK R Y W K
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54
>UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 78
Score = 60.9 bits (141), Expect = 6e-09
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 11 MTKGTSSFGKRRNKTHTLCRRCGRSSYH 94
MTKGT+SFGKR NKTHT+CRRCG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L37e - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 55
Score = 60.1 bits (139), Expect = 1e-08
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 35 GKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAK-LRSYHWSVK 166
GK+ KTH CRRCGR++YHI K CA CG+ +K +R Y W K
Sbjct: 2 GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNK 46
>UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12;
Archaea|Rep: 50S ribosomal protein L37e - Methanococcus
maripaludis
Length = 64
Score = 58.0 bits (134), Expect = 4e-08
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 11 MTKGTSSFGKR-RNKTHTLCRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 166
MTKGT S GK + H +CRRCGR ++H++K CA CG+ ++K++ + W K
Sbjct: 1 MTKGTPSQGKHNKGSNHIVCRRCGRRAFHVRKKVCAACGFGRSSKIKRFAWQWK 54
>UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L37e -
Caldivirga maquilingensis IC-167
Length = 61
Score = 57.6 bits (133), Expect = 5e-08
Identities = 26/40 (65%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 MTKGTSSFGKR-RNKTHTLCRRCGRSSYHIQKSKCAQCGY 127
MTKGT SFG+ R KTH C RCGR SY+I K CA CGY
Sbjct: 1 MTKGTPSFGRMSRGKTHIRCPRCGRHSYNIVKGYCAACGY 40
>UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 89
Score = 37.5 bits (83), Expect = 0.060
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 122 GYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KLTPKKAVA 280
G+ + S +WSVKA MR+++ V +RF++ F+EG + TP+K A
Sbjct: 33 GFNFCDVISDNWSVKAIRRKTTGTGRMRYMRHVPKRFKSNFREGTEATPRKRAA 86
>UniRef50_Q38B22 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1003
Score = 32.3 bits (70), Expect = 2.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 50 KTHTLCRRCGRSSYHIQKSKCAQCG 124
+THT CR C R ++ +K +C CG
Sbjct: 784 RTHTSCRACFRLTFLDEKERCEHCG 808
>UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3;
Thermoprotei|Rep: Methionyl-tRNA synthetase -
Cenarchaeum symbiosum
Length = 548
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +2
Query: 5 EEMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHW 157
+ +GT K + LC CGR I CA CG K S H+
Sbjct: 137 DRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVKRSSRHY 187
>UniRef50_Q9Z746 Cluster: Flagellar M-Ring Protein; n=4;
Chlamydophila|Rep: Flagellar M-Ring Protein - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 341
Score = 31.9 bits (69), Expect = 3.0
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 146 ISIWLQDNHIAHISISECGKMIYHIFCIVYVSYSDAY 36
+ + L +N+IAH++ E K++ H +Y +Y D+Y
Sbjct: 194 LQLTLNENYIAHLTKEESEKIVAHTKHYLYQNYDDSY 230
>UniRef50_Q91F97 Cluster: 428L; n=1; Invertebrate iridescent virus
6|Rep: 428L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 1193
Score = 31.5 bits (68), Expect = 4.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 26 SSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRS 148
SS K ++K H LC+ Y+ ++ CG+ KLR+
Sbjct: 1015 SSLEKPQDKIHALCKELEECGYNYNGTETMMCGWNGKKLRA 1055
>UniRef50_Q3TYB3 Cluster: Visual cortex cDNA, RIKEN full-length
enriched library, clone:K230320F07 product:inversin,
full insert sequence; n=5; Euteleostomi|Rep: Visual
cortex cDNA, RIKEN full-length enriched library,
clone:K230320F07 product:inversin, full insert sequence
- Mus musculus (Mouse)
Length = 736
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 17 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAK 139
+GTSS KRR +T+ RRC ++ C G PA K
Sbjct: 394 QGTSSVEKRRGETNGKHRRCEEGPSSTRQPLCTGSGRPAEK 434
>UniRef50_Q55IZ8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 364
Score = 31.5 bits (68), Expect = 4.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 56 HTLCRRCGRSSYHIQKSKCAQCGYPAAK 139
H+ C C RSS +QK KC C PA++
Sbjct: 50 HSFCSHCIRSSLDVQK-KCPSCNEPASE 76
>UniRef50_Q5NNC1 Cluster: Amidophosphoribosyltransferase; n=2;
Zymomonas mobilis|Rep: Amidophosphoribosyltransferase -
Zymomonas mobilis
Length = 281
Score = 31.1 bits (67), Expect = 5.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 56 HTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSY 151
H+ C C +S + + + C QCG+P + + Y
Sbjct: 41 HSFCVECWQSLHFLVEPACIQCGFPLPRDQQY 72
>UniRef50_A2ZIS5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 409
Score = 31.1 bits (67), Expect = 5.3
Identities = 12/22 (54%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -3
Query: 140 IWLQDNHIAH-ISISECGKMIY 78
IWLQDN++ + + IS+CGK I+
Sbjct: 276 IWLQDNNVPYNVLISDCGKKIF 297
>UniRef50_Q9TZK7 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 671
Score = 31.1 bits (67), Expect = 5.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 29 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 136
++ K TH C +CG+ + + KC CG P A
Sbjct: 93 TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126
>UniRef50_Q4RRM6 Cluster: Chromosome 16 SCAF15002, whole genome
shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 16
SCAF15002, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2318
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = -2
Query: 120 HCAHFDF*MW*DDLP--HLLHSVCVL--FRRLPKLEVPFVISS 4
H H +F W + LP HLL + +L FRRLP+L+ P +I++
Sbjct: 379 HYRHQEFSPWLNLLPWEHLLDDLPLLVSFRRLPQLDAPVMITT 421
>UniRef50_Q3VZK4 Cluster: UvrD/REP helicase:HRDC domain; n=1;
Frankia sp. EAN1pec|Rep: UvrD/REP helicase:HRDC domain -
Frankia sp. EAN1pec
Length = 759
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 20 GTSSFGKRRNKTHTLCRRCGR--SSYHIQKSKCAQC 121
GT+ G+ RN++ LCR CGR + + +C C
Sbjct: 639 GTAGNGRARNRSSVLCRVCGRALAGAEARVGRCEAC 674
>UniRef50_Q22LU3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 755
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 20 GTSSFGKRRNKTHTLCRRCGRSSYH-IQKSKCAQCGYPAAKLRSYHWS 160
GT G NK +C++CG + I +++C +C Y +L++ ++S
Sbjct: 80 GTCPLGYYSNKKSKICQKCGNNCMQCINENQCTKC-YSNFQLKTQYFS 126
>UniRef50_A7ATD9 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 635
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 115 AMWLSCSQIEIIPLVSQS*AQEDYWNWPHASLEN 216
A W SC+ ++II L+ +S D NW H ++N
Sbjct: 137 ARWSSCTVVQIIELLCRSGRLFDLHNWLHLYMKN 170
>UniRef50_Q2M0M7 Cluster: GA10477-PA; n=1; Drosophila
pseudoobscura|Rep: GA10477-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 664
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 38 KRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 133
KRR + RRCG + H+++SKC +C +PA
Sbjct: 54 KRRERYCKAKRRCGHTK-HVEQSKCRRC-HPA 83
>UniRef50_A2BLL7 Cluster: Conserved archaeal protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Conserved archaeal
protein - Hyperthermus butylicus (strain DSM 5456 / JCM
9403)
Length = 386
Score = 30.3 bits (65), Expect = 9.2
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 65 CRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSV 163
C RCG +++ +C +CGY L+ + W V
Sbjct: 12 CLRCGYELHNVVLPRCPRCGYNMIVALKEFEWRV 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,543,207
Number of Sequences: 1657284
Number of extensions: 5104024
Number of successful extensions: 13321
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 12984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13317
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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