Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K15
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 8/28 (28%)
 Frame = +2

Query: 239 VYFFYS--------ILFLCMLLILIVFY 298
           +Y+FYS        +LF C+L+IL+  Y
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIY 239



 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 236 VVYFFYSILFLCMLLILIVFYVI*FRC 316
           + YF+Y  L  C   I+   +++   C
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLC 284


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 221 AAS*SVVYFFYSILFLCMLLILIVFY 298
           A +   VY+F S+  L + L+ + FY
Sbjct: 313 ATTLETVYYFISLGLLILRLVSVCFY 338


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 202 IKRHFFGGILVCRV 243
           I   F+GG L+C+V
Sbjct: 102 ITYRFYGGFLLCKV 115


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 86  WVRGVTLCIYCLNIKIKDSRLKSLYST 166
           W+R V  C+Y L      S   SL+ T
Sbjct: 137 WIRAVRKCLYKLWKMPSLSEFLSLFGT 163


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 86  WVRGVTLCIYCLNIKIKDSRLKSLYST 166
           W+R V  C+Y L      S   SL+ T
Sbjct: 137 WIRAVRKCLYKLWKMPSLSEFLSLFGT 163


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 61  LPLTTILTHVFRFFL 17
           +PL  +LTH+  F L
Sbjct: 450 IPLVVVLTHLIPFML 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,334
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)