Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K13
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...   263   8e-73
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              25   0.45 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.6  

>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score =  263 bits (644), Expect = 8e-73
 Identities = 123/134 (91%), Positives = 130/134 (97%)
 Frame = +2

Query: 62  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPTGIDNRVRRRFKGQYLMPNIGYG 241
           MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 242 SNKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIR 421
           SNKKTRHMLP+GFRKVLVHNV+ELE+LMMQNRK+CAEIAHG SSKKRK+IVERAQQLSIR
Sbjct: 61  SNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIR 120

Query: 422 VTNAAARLRSQENE 463
           VT A+ARLRSQENE
Sbjct: 121 VTYASARLRSQENE 134


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -2

Query: 169 FTPVPLKFIITIRLVTNKSFRPLFDDCRSVNRSDSHFK 56
           F P  +K ++ + L+   S + L  DC +++  + H K
Sbjct: 79  FKPQGIKAVMEL-LIDENSVKQLVSDCSTISEENPHLK 115


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 13/61 (21%), Positives = 26/61 (42%)
 Frame = +2

Query: 218 LMPNIGYGSNKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVE 397
           L   +  G   + +  +P G+   +   + EL  L +  + +   + HG+    R  IV+
Sbjct: 66  LAAKVWNGQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGLI---RDLIVD 122

Query: 398 R 400
           R
Sbjct: 123 R 123


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 122 RHQSDRYDKLKRNWRKPTG 178
           +++  +YDKLK+   + TG
Sbjct: 147 KYEFSKYDKLKKKLEEWTG 165


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 122 RHQSDRYDKLKRNWRKPTG 178
           +++  +YDKLK+   + TG
Sbjct: 162 KYEFSKYDKLKKKLEEWTG 180


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 362 GVSSKKRKAIVERAQQLSIR 421
           G   KK+K  +  AQ LSIR
Sbjct: 89  GAKQKKKKRSLMGAQGLSIR 108


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 122 RHQSDRYDKLKRNWRKPTG 178
           +++  +YDKLK+   + TG
Sbjct: 50  KYEFSKYDKLKKKLEEWTG 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,825
Number of Sequences: 438
Number of extensions: 2987
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)