Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K12
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 423 LSQVPWSVECGSPQAG 470
           +++ PWS+ CG P  G
Sbjct: 352 VNERPWSLYCGEPPCG 367


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 44  SPNTQTHPSASCKYADSTSSTGVA 67


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 107 NPCKQSHDSASLRTTSKTESTSSA 36
           +P  Q+H SAS +    T ST  A
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVA 111


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 49  DSVLDVVRKEAESCDCLQGF 108
           D V    RK AE C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 108 PTHTLPRRRYWLRYGH 155
           P HT    R W+++GH
Sbjct: 486 PWHTFYDYRPWVQHGH 501


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 385 SSRHMWVWIV 356
           S +H W+W+V
Sbjct: 214 SHQHAWIWLV 223


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 385 SSRHMWVWIV 356
           S +H W+W+V
Sbjct: 447 SHQHAWIWLV 456


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 385 SSRHMWVWIV 356
           S +H W+W+V
Sbjct: 447 SHQHAWIWLV 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,588
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)