Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K11
         (90 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q011J0 Cluster: PolI-like DNA polymerase, putative; n=2...    35   0.40 
UniRef50_Q7Z152 Cluster: Collagen protein 51; n=4; Caenorhabditi...    27   0.52 
UniRef50_Q58MX6 Cluster: Phage tail fiber-like protein; n=1; Cya...    26   1.9  
UniRef50_Q23649 Cluster: Putative uncharacterized protein col-37...    32   2.1  
UniRef50_Q7QI36 Cluster: ENSANGP00000020537; n=1; Anopheles gamb...    32   2.8  
UniRef50_Q9TZ57 Cluster: Collagen protein 69; n=2; Caenorhabditi...    25   9.6  
UniRef50_Q61EV0 Cluster: Putative uncharacterized protein CBG119...    25   9.7  

>UniRef50_Q011J0 Cluster: PolI-like DNA polymerase, putative; n=2;
           Ostreococcus|Rep: PolI-like DNA polymerase, putative -
           Ostreococcus tauri
          Length = 968

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 86  RTWRMRAMGDQP*TPSARSSGSGWRGPR 3
           R++  RA G +P TPSAR   SGWR  R
Sbjct: 31  RSYSERARGIEPKTPSARGGSSGWRNAR 58


>UniRef50_Q7Z152 Cluster: Collagen protein 51; n=4;
           Caenorhabditis|Rep: Collagen protein 51 - Caenorhabditis
           elegans
          Length = 435

 Score = 27.5 bits (58), Expect(2) = 0.52
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 88  GGPGGC--ALWATNHRRHPPGPPGVDG 14
           GG GGC  A  A+     PPGPPG  G
Sbjct: 120 GGGGGCHCAAQASGCPAGPPGPPGEAG 146



 Score = 25.8 bits (54), Expect(2) = 0.52
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 40  PPGPPGVDGEA 8
           PPGPPG DG A
Sbjct: 182 PPGPPGPDGNA 192


>UniRef50_Q58MX6 Cluster: Phage tail fiber-like protein; n=1;
           Cyanophage P-SSM2|Rep: Phage tail fiber-like protein -
           Cyanophage P-SSM2
          Length = 559

 Score = 25.8 bits (54), Expect(2) = 1.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 40  PPGPPGVDGE 11
           PPGPPG DG+
Sbjct: 335 PPGPPGADGD 344



 Score = 25.4 bits (53), Expect(2) = 1.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 85  GPGGCALWATNHRRHPPGPPGVDG 14
           GPGG           PPGPPG  G
Sbjct: 306 GPGGTGPTGPTGDDGPPGPPGPGG 329


>UniRef50_Q23649 Cluster: Putative uncharacterized protein col-37;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein col-37 - Caenorhabditis elegans
          Length = 330

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 88  GGPGGC--ALWATNHRRHPPGPPGVDGEA 8
           GG GGC  A  A+     PPGPPG DG A
Sbjct: 87  GGGGGCQCAAQASGCPAGPPGPPGPDGSA 115


>UniRef50_Q7QI36 Cluster: ENSANGP00000020537; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000020537 - Anopheles gambiae
           str. PEST
          Length = 507

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 6   RASPSTPGGPGGWRLW--LVAHSAHPPG 83
           R +   PGG  GW+ W  LV HS HP G
Sbjct: 288 RGAGRVPGGDRGWQGWSSLVRHSLHPAG 315


>UniRef50_Q9TZ57 Cluster: Collagen protein 69; n=2;
           Caenorhabditis|Rep: Collagen protein 69 - Caenorhabditis
           elegans
          Length = 394

 Score = 24.6 bits (51), Expect(2) = 9.6
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 40  PPGPPGVDGEA 8
           PPG PGV GEA
Sbjct: 280 PPGTPGVQGEA 290



 Score = 24.2 bits (50), Expect(2) = 9.6
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 88  GGPGGCALWATNHRRHPPGPPGVDG 14
           G PG C          PPGPPG  G
Sbjct: 261 GLPGQCGPPGPPGYTPPPGPPGTPG 285


>UniRef50_Q61EV0 Cluster: Putative uncharacterized protein CBG11921;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG11921 - Caenorhabditis
           briggsae
          Length = 320

 Score = 25.0 bits (52), Expect(2) = 9.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 40  PPGPPGVDGEA 8
           PPGPPG DG A
Sbjct: 245 PPGPPGKDGGA 255



 Score = 23.8 bits (49), Expect(2) = 9.7
 Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = -3

Query: 88  GGPGGCALWATNHRRHP--PGPPGVDG 14
           G PG     +TN    P  PGPPG  G
Sbjct: 201 GPPGAAGTTSTNEPGPPGPPGPPGPAG 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,609,831
Number of Sequences: 1657284
Number of extensions: 2017698
Number of successful extensions: 11892
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11830
length of database: 575,637,011
effective HSP length: 11
effective length of database: 557,406,887
effective search space used: 10033323966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)