Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K11
         (90 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   2.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   3.4  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    19   3.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    19   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    19   4.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   6.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    18   7.9  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            18   7.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    18   7.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 78  ADARYGRPTIDAIRPVLRE 22
           A+ + G P IDAI   LRE
Sbjct: 344 ANGQTGFPWIDAIMTQLRE 362


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 87  EDLADARYGRPT-IDAIRPVLRE 22
           +D+A  RY R T I +  P LR+
Sbjct: 178 KDMASTRYARQTFIFSAIPFLRD 200


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = +3

Query: 45  RLWLVAHSAHP 77
           R WL  H  HP
Sbjct: 194 RAWLFQHLTHP 204


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = +3

Query: 45  RLWLVAHSAHP 77
           R WL  H  HP
Sbjct: 350 RAWLFQHLTHP 360


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = -2

Query: 86  RTWRMRAMGDQP*TPSARSSGSGWRGP 6
           R W M    D   TP    SG    GP
Sbjct: 302 RAWAMDDESDINGTPPLHISGPAEAGP 328


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 30  GPGGWRLWLVA 62
           G  GW  W+VA
Sbjct: 281 GSVGWNDWIVA 291


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
          neuroblasts defectiveprotein protein.
          Length = 224

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 75 DARYGRPTIDAIRPVL 28
          +ARY  P++   RP+L
Sbjct: 21 NARYLPPSLSDTRPML 36


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 12  SPSTPGGPGGWRLWLVAHSAHPPGPP 89
           S S   G GG+ L   + + HP   P
Sbjct: 26  SNSPEAGGGGFWLAAASGAPHPAALP 51


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 12  SPSTPGGPGGWRLWLVAHSAHPPGPP 89
           S S   G GG+ L   + + HP   P
Sbjct: 26  SNSPEAGGGGFWLAAASGAPHPAALP 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,239
Number of Sequences: 336
Number of extensions: 405
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 11
effective length of database: 118,889
effective search space used:  2140002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)