Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K11
(90 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 0.33
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 0.33
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 0.33
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 0.77
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 1.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 20 2.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 20 2.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 20 2.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 5.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 19 7.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 7.1
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 18 9.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 18 9.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 18 9.4
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 0.33
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 46 RHPPGPPGVDGE 11
R PGPPGV G+
Sbjct: 329 RENPGPPGVPGD 340
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 0.33
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 46 RHPPGPPGVDGE 11
R PGPPGV G+
Sbjct: 329 RENPGPPGVPGD 340
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 0.33
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 46 RHPPGPPGVDGE 11
R PGPPGV G+
Sbjct: 268 RENPGPPGVPGD 279
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 0.77
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 3 TRASPSTPGGPGG 41
T +PS P GPGG
Sbjct: 392 TPCTPSPPRGPGG 404
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 1.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 55 NHRRHPPGPPGVDGEALV 2
+H HPP PG E ++
Sbjct: 464 HHHPHPPETPGPQVETIL 481
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.2 bits (40), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 78 ADARYGRPTIDAIRPVLRE 22
A+ + G P IDAI LRE
Sbjct: 348 ANGQTGFPWIDAIMTQLRE 366
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 20.2 bits (40), Expect = 2.3
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = -1
Query: 75 DARYGRPTI-DAIRPVLREWMER 10
D Y P + D ++ VLR W+ R
Sbjct: 193 DLNYYNPVVLDDMQNVLRFWLRR 215
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.2 bits (40), Expect = 2.3
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = -1
Query: 75 DARYGRPTI-DAIRPVLREWMER 10
D Y P + D ++ VLR W+ R
Sbjct: 193 DLNYYNPVVLDDMQNVLRFWLRR 215
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 32 TGRMASMVGRP*RASARS 85
+G M VG P ASA S
Sbjct: 1756 SGTMGPPVGHPTNASAHS 1773
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 3 TRASPSTPGG 32
T SPS PGG
Sbjct: 77 TSTSPSYPGG 86
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 18.6 bits (36), Expect = 7.1
Identities = 5/12 (41%), Positives = 8/12 (66%)
Frame = +3
Query: 18 STPGGPGGWRLW 53
+TP G W++W
Sbjct: 1012 NTPKGNMQWKIW 1023
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/14 (42%), Positives = 7/14 (50%)
Frame = +3
Query: 45 RLWLVAHSAHPPGP 86
R W + HS P P
Sbjct: 226 RSWRITHSYFMPDP 239
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 80 WRMRAMGDQP*TPSARS 30
WR R +GD+ P S
Sbjct: 1635 WRSRYLGDRMQRPMKES 1651
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 80 WRMRAMGDQP*TPSARS 30
WR R +GD+ P S
Sbjct: 1631 WRSRYLGDRMQRPMKES 1647
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,848
Number of Sequences: 438
Number of extensions: 478
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 11
effective length of database: 141,525
effective search space used: 2547450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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