Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K08
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   2.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   4.0  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.0  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +2

Query: 128 PISETCVLGGTHQDTDYNTEVDENDKEFILEG 223
           P  + C  GG   D      VDEN  E I  G
Sbjct: 200 PSIKVCDDGGVQSDGKATAPVDENKNEIIAPG 231


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -1

Query: 401 HR*RNPRTMSVHYHHVHSYGRRVSRLSSLHPILFQYDLASVPPSHL-NVLHFLMQG 237
           H+ ++P     H+HH H +     +  S  P  +      +PP H+ N+ +F   G
Sbjct: 173 HQQQHPGHSQHHHHHHHHHPHHSQQQHSASPRCY-----PMPPEHMYNMFNFNRNG 223


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 311 PILFQYDLASVPPSHLNVLHFL 246
           P+LF   LA++ P HL+  HF+
Sbjct: 583 PVLF---LAAINPEHLSYFHFV 601


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 332 KLFVHNYGHGGSGLTLFWGCATD 400
           KL  HN  H G+   L W  A +
Sbjct: 3   KLIQHNQNHCGAAFNLMWQTARE 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,173
Number of Sequences: 2352
Number of extensions: 10593
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)