Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K06
(439 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 36 0.003
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.005
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 34 0.008
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 34 0.008
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 34 0.011
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 33 0.019
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 33 0.025
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 32 0.034
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 32 0.044
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 32 0.044
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 32 0.044
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 32 0.044
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 31 0.059
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.059
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 31 0.10
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 30 0.14
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 30 0.14
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 30 0.18
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 30 0.18
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 30 0.18
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 0.24
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 29 0.24
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 29 0.24
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 29 0.31
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.31
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 29 0.41
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 0.55
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 28 0.55
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 0.72
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 27 0.96
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 0.96
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 27 1.3
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 1.3
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 1.3
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 1.3
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 1.3
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 26 2.2
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 26 2.2
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 2.9
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 26 2.9
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 25 3.9
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 25 3.9
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 25 3.9
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 25 3.9
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 25 5.1
SPAC4G8.11c |atp10||F1-F0 ATPase assembly protein|Schizosaccharo... 25 5.1
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 5.1
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 25 5.1
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 25 5.1
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 25 5.1
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 6.7
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 25 6.7
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 6.7
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 6.7
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 25 6.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 6.7
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 25 6.7
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 24 8.9
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 24 8.9
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 24 8.9
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 24 8.9
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 24 8.9
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 24 8.9
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 24 8.9
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 35.9 bits (79), Expect = 0.003
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
S+ Q+++A DG+V +W L SG+C L+ H D
Sbjct: 559 SQGTQVVSAAADGLVKVWSLSSGECVATLDNHED 592
Score = 28.3 bits (60), Expect = 0.55
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
L TAGE +++ WD +SG ++L+P D+
Sbjct: 248 LYTAGEGNLILAWDWKSG---SRLDPGVDT 274
Score = 27.5 bits (58), Expect = 0.96
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGP 200
++QL + D + +W++ + +C LE HT + + I + S D +V
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLV----- 573
Query: 201 RLALWHLRSLDAVTVFDIPDHGIH--VSFFHDDCIIAGG 311
+W L S + V D + + S F +++GG
Sbjct: 574 --KVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGG 610
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 35.1 bits (77), Expect = 0.005
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLA 209
L+T ED + LWDL + K H S S +IV G G R A
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSL--------DFSHNGRFIVSGSGDRTA 426
Query: 210 -LWHLRSLDAVTVFDIPDHGIHVSFFHDDCIIAGGTAKHLYQL-SYSGEVKVELPVSPTT 383
LW + + + +I + ++ +D IA G+ + ++ S SG + L +
Sbjct: 427 RLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKES 486
Query: 384 VYSAVLRTSPNNVLAIAG 437
VYS + SP++ + ++G
Sbjct: 487 VYS--IAFSPDSSILLSG 502
Score = 27.5 bits (58), Expect = 0.96
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 15 SKNQQLITAGE-DGVVMLWDLRSGKCHNKLE 104
S N + I +G D LWD+ +G+C KLE
Sbjct: 411 SHNGRFIVSGSGDRTARLWDVETGQCILKLE 441
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 34.3 bits (75), Expect = 0.008
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
LITAG+D ++ +WD ++ C LE HT++
Sbjct: 201 LITAGDDNLIKVWDYQTKACVRILEGHTNN 230
Score = 24.2 bits (50), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLW 68
HSK +I+ EDG V +W
Sbjct: 237 HSKFPIIISGSEDGTVKIW 255
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.3 bits (75), Expect = 0.008
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
S Q++IT +DG + +WD+ SG C HT +
Sbjct: 349 SDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSA 383
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 33.9 bits (74), Expect = 0.011
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ + Q+ G DG + +WDLR+ C + L+ H D
Sbjct: 185 IAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKD 220
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 33.1 bits (72), Expect = 0.019
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWI--GSASLTDDWIVCGGGP 200
+LI+ D + +W+ R+ +C + L HTDS + + GSA T GG
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGK 384
Query: 201 RLAL-WHLRSLDAVTVFDIPDHGIHVSFFHDDCI 299
R+ L H +++V + I D G+ +S D I
Sbjct: 385 RITLRGHTGPVNSVRI--IRDRGLVLSGSDDSTI 416
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ +L + DG + WD+ KC + L H +
Sbjct: 444 DSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIE 475
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
+LI+ DGVV +W+ + +C + L+ H++ S
Sbjct: 486 RLISGAHDGVVKVWE--ACECVHTLKNHSEPVTS 517
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 32.7 bits (71), Expect = 0.025
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDI 140
H QLIT G+ ++ +WD R +C N + + + D+
Sbjct: 999 HQFEDQLITLGDKDIIQVWDWRRNRCLNSFKTSASATTNVTDM 1041
Score = 27.1 bits (57), Expect = 1.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 24 QQLITAGEDGVVMLWDLR 77
++LI+A DG V LWD+R
Sbjct: 1192 RELISASSDGEVKLWDIR 1209
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 32.3 bits (70), Expect = 0.034
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Frame = +3
Query: 18 KNQQLITAGE-DGVVMLWDLR----SGKC---HNKLEPHTDSKVSRPDIGKWIGSASLTD 173
KN+ ++ +G DG LWD+R S C HNK P + +S + S
Sbjct: 200 KNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTVNGLAWTSDAR 259
Query: 174 DWIVCGGGPRLALWHLRS-LDAVTVFDIPDHGIHVSFFHDDCII 302
CG R+ +W++ S + + F H SF C+I
Sbjct: 260 YLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHPCMI 303
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 31.9 bits (69), Expect = 0.044
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
L+T D V +WDLR+G+C HT +
Sbjct: 459 LVTGSTDRTVRVWDLRTGECKQVFYGHTST 488
Score = 25.8 bits (54), Expect = 2.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGK 86
++ + +G + LWD+RSGK
Sbjct: 709 DESKVVSGSHSTLQLWDIRSGK 730
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 31.9 bits (69), Expect = 0.044
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEP 107
+ H +Q L TAG DGVV WD++ K L P
Sbjct: 240 KFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLNP 273
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 31.9 bits (69), Expect = 0.044
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLA 209
L+++G D + W+ SG C ++ H DS+V+R I S ++ G P +
Sbjct: 13 LVSSGYDHTIRFWEALSGICSRTIQ-HADSQVNRLCI-------SPDKKFLAAAGNPHVR 64
Query: 210 LWHLRSLDAVTVFDIPDHGIHVSFFHDDCIIAGGTAKHLYQLSYSGEVKV 359
L+ + + + + H +V+ C K L S G VKV
Sbjct: 65 LYDINTSSQMPLMTFEGHTNNVTAIAFHC-----DGKWLATSSEDGTVKV 109
Score = 28.3 bits (60), Expect = 0.55
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRS 80
H + L T+ EDG V +WD+R+
Sbjct: 92 HCDGKWLATSSEDGTVKVWDMRA 114
Score = 27.1 bits (57), Expect = 1.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKV 125
L+TA D V LW+L SG+ + H + V
Sbjct: 274 LVTASSDHVARLWELSSGETIRQYSGHHKAAV 305
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 31.9 bits (69), Expect = 0.044
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKC 89
VH L + G+DGV+ +W++ +G+C
Sbjct: 387 VHVSGNWLASGGDDGVLRIWEVMTGRC 413
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 31.5 bits (68), Expect = 0.059
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
+ + ++TA D + LW LR+ KC H+DS
Sbjct: 224 ISDDGRTILTASSDATIKLWSLRAQKCLFSFIAHSDS 260
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 31.5 bits (68), Expect = 0.059
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSR--PDIGKWIGSASLTDDWIVCGGGPRLA 209
+ G D + +WDLRSGK L+ H V+ G + ++S D +
Sbjct: 324 SGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADD---------TVK 374
Query: 210 LWHLRSLDAVTVFDIPDHGIHVSFFHDDCIIAGGTAKHLYQLSYSGEVKVELPVSPTTVY 389
+W LR + IP H VS D I G + + Y G VK+ P++ + +
Sbjct: 375 IWDLRKVS--LAHTIPAHSSLVS---DVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIK 429
Query: 390 SAV 398
S V
Sbjct: 430 SMV 432
Score = 25.0 bits (52), Expect = 5.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGKCHNKLEPHT 113
QL T+ D V +WDLR + + H+
Sbjct: 363 QLATSSADDTVKIWDLRKVSLAHTIPAHS 391
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 30.7 bits (66), Expect = 0.10
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWI--GSASLT 170
SK ++TA D + WD+ +G C + H GK+I GS+ LT
Sbjct: 357 SKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLT 410
Score = 29.9 bits (64), Expect = 0.18
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKV 125
V ++++++ G DG V +W+ +G+ H L +S+V
Sbjct: 435 VRFNDEKIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRV 473
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.3 bits (65), Expect = 0.14
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
++H L+TAG D V +WD+R+ + + L H + S
Sbjct: 254 KLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVAS 294
Score = 28.7 bits (61), Expect = 0.41
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPH 110
V + Q++T D + LWDL +GK L H
Sbjct: 297 VQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHH 330
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGK 86
V ++ L + GED +V WDL + K
Sbjct: 213 VSPRHPYLFSCGEDKMVKCWDLETNK 238
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 30.3 bits (65), Expect = 0.14
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVC 188
V ++ ++A D + LWDLRS C L VS P + + + + V
Sbjct: 120 VSPADETFLSASLDNTIRLWDLRSPNCQGLL------NVSSPVVAAFDATGLIFAS--VS 171
Query: 189 GGGPRLALWHLRSLDAVTVFDIP 257
+++L++++S DA DIP
Sbjct: 172 ERKYKISLYNIKSFDARPFQDIP 194
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.9 bits (64), Expect = 0.18
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
L+T D V +W L G CH + H DS
Sbjct: 591 LVTCSADKNVKIWGLDFGDCHKSIFAHQDS 620
Score = 25.4 bits (53), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
S + L++ G+D + LWDL C +E H D
Sbjct: 183 SSDSFLLSVGKDSFMKLWDLSIQHC---VETHVD 213
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.9 bits (64), Expect = 0.18
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGKCHNKLEPHT 113
QL + G D + +WD RS + +K E HT
Sbjct: 263 QLASGGNDNNLFVWDYRSSRPLHKFEEHT 291
Score = 29.1 bits (62), Expect = 0.31
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 18 KNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
K QL + GV+ +WD+ S K L+ H++
Sbjct: 177 KGTQLAVGTDSGVIYIWDIESTKSVRSLKGHSE 209
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 29.9 bits (64), Expect = 0.18
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGK-CHNKLEPHTDSKVSRPDIG 143
V+ + ++TAG D ++ +WDLR+ K H+ P +++ D G
Sbjct: 273 VNRDGRYMVTAGADSLLKVWDLRTYKELHSYYTPTPAQRLTLSDRG 318
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 29.5 bits (63), Expect = 0.24
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGK 86
++ I +G DG V LWD+R+GK
Sbjct: 638 DEHKIISGNDGSVKLWDVRTGK 659
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 33 ITAGEDGVVMLWDLRSGKCHNKLEPH 110
I+ D + +WDL +G C LE H
Sbjct: 563 ISGSMDKSIRVWDLSTGTCKYVLEGH 588
Score = 25.0 bits (52), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGK 86
+LI+ D + +WDL +GK
Sbjct: 601 RLISGSADSTIRIWDLNTGK 620
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.24
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 33 ITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
++A D + LWDL G+C ++ HT +S
Sbjct: 79 LSASWDKTIRLWDLEKGECTHQFVGHTSDVLS 110
Score = 25.4 bits (53), Expect = 3.9
Identities = 19/88 (21%), Positives = 35/88 (39%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLALW 215
+ G DG +MLWDL H S ++ +I + S + W+ G + ++
Sbjct: 209 SGGRDGTLMLWDLNE-------STHLYSLEAKANINALVFSPNRY--WLCAATGSSIRIF 259
Query: 216 HLRSLDAVTVFDIPDHGIHVSFFHDDCI 299
L + + V + G+ +CI
Sbjct: 260 DLETQEKVDELTVDFVGVGKKSSEPECI 287
Score = 25.0 bits (52), Expect = 5.1
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGP 200
N ++AG D V +WDL + HT ++ + +++ D +C G
Sbjct: 162 NLTFVSAGWDKAVKVWDLETFSLRTSHYGHTG----------YVSAVTISPDGSLCASGG 211
Query: 201 R---LALWHL 221
R L LW L
Sbjct: 212 RDGTLMLWDL 221
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 29.5 bits (63), Expect = 0.24
Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 13/116 (11%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEP----HTDSKVSRP------DIGKWIG 155
R N ++ + G D ++LWD H + S S+P D+G
Sbjct: 418 RCDDDNYRIASVGLDRKLLLWDFSVSAIHRPKSAVYYVNHHSNNSKPAISDFDDVGDLTM 477
Query: 156 SASLTDDWIVCGG---GPRLALWHLRSLDAVTVFDIPDHGIHVSFFHDDCIIAGGT 314
+ + + V G P L+ + + +T++D+ D + FF DC+I T
Sbjct: 478 GSEIDNSNYVNGDITIHPTLSRSLIPVISPITIYDVDDSPLSSVFFDPDCMITCAT 533
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.1 bits (62), Expect = 0.31
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHT 113
L +A E G++ +WDLRS H H+
Sbjct: 544 LASADESGIIKVWDLRSSNQHVSFVKHS 571
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 29.1 bits (62), Expect = 0.31
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 18 KNQQLITAGEDGVVMLWDLR 77
K +T G DG+V +WDLR
Sbjct: 557 KGNLFVTGGSDGIVKVWDLR 576
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 28.7 bits (61), Expect = 0.41
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLR-SGKCHNK 98
L++ GED + +WDLR S KC N+
Sbjct: 313 LLSRGEDNALRVWDLRNSNKCVNE 336
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 0.55
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPH 110
++ AG + VV LW+++SG C ++ H
Sbjct: 29 VLAAGNERVVRLWNVKSGACIHEYAGH 55
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGKCHNKLEPH 110
+ G D + +WD+ +GK +L H
Sbjct: 73 SCGGDKFIQVWDVNTGKVDRRLGGH 97
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 28.3 bits (60), Expect = 0.55
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWI 152
V+ + I+ G DGV+ + D +G+ +K + ++S + +WI
Sbjct: 67 VNESGTEFISVGSDGVLKIADTSTGRVSSKWIVDKNKEISPYSVVQWI 114
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.9 bits (59), Expect = 0.72
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLE 104
S + LIT +D V WD+ +G+C L+
Sbjct: 444 SSDDVLITGADDKTVRQWDIVTGRCIQTLD 473
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 0.96
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGKCHNKL-EP 107
TA DG+ +WD+ SG+C L EP
Sbjct: 197 TASYDGMARIWDVLSGQCLKTLVEP 221
Score = 27.1 bits (57), Expect = 1.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
L++ D V +W+L+ G C L H++ +S
Sbjct: 153 LVSGSWDETVRIWNLQDGTCLRMLPAHSEPIIS 185
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 27.5 bits (58), Expect = 0.96
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLE 104
N+ L+TA DG++ WD G + L+
Sbjct: 501 NRILVTASLDGILKFWDFNKGNLIDSLD 528
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSG 83
L+TA DG + WDL +G
Sbjct: 587 LVTASLDGTIRTWDLPTG 604
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 27.1 bits (57), Expect = 1.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 340 TPGRLKSSCQSHRPLYTRQ 396
T G ++SS ++HRP Y+RQ
Sbjct: 635 TLGHIESSIENHRPRYSRQ 653
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 1.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRS 80
S QL + G D VV +WD RS
Sbjct: 314 SDGLQLASGGNDNVVQIWDARS 335
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 27.1 bits (57), Expect = 1.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 3 TRVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
T S + + + G V+LWD+ + K K+E H DS
Sbjct: 152 TEGESSSPNVSNSAVSGQVILWDVINCKQITKIEAHKDS 190
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 1.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
H L + +D +V WD R+G C L H ++
Sbjct: 215 HPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNT 250
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 1.3
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHT----DSKVSRPDIGKWIGSASLTDDW 179
H K L DG + +W L SGK + HT K P +GK + A++ D
Sbjct: 155 HPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRL--ATVDDSG 212
Query: 180 IVCGGGPRLALWHLRSLDAVTVFDIPDHGIHVSFFHDDCIIAGGTAKHLYQLSYSGEVKV 359
+ P R FD + + DC G L+ SG+VKV
Sbjct: 213 TLIVWNPATGAPECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNV---LFLGGSSGKVKV 269
Score = 26.2 bits (55), Expect = 2.2
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGG-GPRLAL 212
+ G D + +WD+ +G+ +L H DS V+ W S +I GG ++ L
Sbjct: 79 SGGGDDLGYIWDITTGEQICQLTGHKDSIVAI----DW----SFDGTYIATGGMDSQVRL 130
Query: 213 WHLRS-LDAVTVFDIPDHGIHVSFFHDDCIIAGG 311
W + + +T F+ D + +S+ +A G
Sbjct: 131 WKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAG 164
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
L+TA D V+ WD+RSG+ + H +
Sbjct: 341 LLTACADCVIRKWDVRSGQLLGEYTGHQE 369
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 2.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRS 80
+IT G +G + LWD+RS
Sbjct: 70 VITCGSEGEIHLWDIRS 86
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 2.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
R K + + T D + W++ +G+C L HTD
Sbjct: 97 RKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIGHTD 133
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
N ++ +D V +WDL +G L H D
Sbjct: 136 NTTFLSGSDDKTVKVWDLSTGAVQYDLSGHED 167
Score = 25.4 bits (53), Expect = 3.9
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRL 206
+L++ G DG + LWD R H ++ D+ + S S ++ GGP +
Sbjct: 179 RLVSGGYDGTIRLWDTRIADPEVMSFSHGEA----IDVVLPMQSGST----VISAGGPSI 230
Query: 207 ALWHL 221
+W L
Sbjct: 231 KVWDL 235
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
L+++ +D + +WD+RS K L H D
Sbjct: 446 LVSSSQDTTLKVWDVRSKKMKFDLPGHED 474
Score = 25.4 bits (53), Expect = 3.9
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPH 110
+ ++ D + +WD + GKC + L+ H
Sbjct: 283 IYSSSYDKTIRIWDAKDGKCLHILKGH 309
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 3.9
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +3
Query: 27 QLITAGE-DGVVMLWDLRSGK 86
QLI G +G V LWDLR G+
Sbjct: 257 QLIAGGAYNGQVFLWDLRQGQ 277
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 3.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLW 68
R + + L TAG++G +MLW
Sbjct: 74 RFNPEGNILATAGDEGTIMLW 94
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 3.9
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +3
Query: 24 QQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKV 125
+ L++ G++GV++LW + + H + P S +
Sbjct: 275 EYLLSGGQEGVLVLWQMETS--HRQFLPRLGSSI 306
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSG 83
L+TA D +LWDLR G
Sbjct: 81 LLTASRDWKCILWDLRDG 98
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 25.0 bits (52), Expect = 5.1
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRS--GKCHNKLEPHTD 116
L TA D V LWDLR+ + H LE H D
Sbjct: 297 LATASADKTVALWDLRNPYQRLHT-LEGHED 326
>SPAC4G8.11c |atp10||F1-F0 ATPase assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.0 bits (52), Expect = 5.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 84 KCHNKLEPHTDSKVSRPDIG---KWIGSASLTDD 176
KC N+ D+K S P+IG K +G+ L DD
Sbjct: 201 KCWNEYITAYDNKFSFPEIGWNNKLVGNVYLIDD 234
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.0 bits (52), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
L++ D + LWDL + C H+D KVS
Sbjct: 270 LVSGSADTTLKLWDLSTCNCVKSFTYHSD-KVS 301
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.0 bits (52), Expect = 5.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDL 74
+L T G+D VV LWDL
Sbjct: 330 KLATCGDDCVVSLWDL 345
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 33 ITAGEDGVVMLWDLRSGKC 89
+T G D + LWDLR+ C
Sbjct: 164 VTGGCDKLAKLWDLRAAYC 182
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 5.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWD 71
V+ + LITA DG V +WD
Sbjct: 245 VYPVDDYLITASSDGSVCIWD 265
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 24.6 bits (51), Expect = 6.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 60 MLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIV 185
+L+ L S N + P+ D+ S D+ SLT DWIV
Sbjct: 89 VLFPLHSEHPENNIPPN-DNNYSISDLSIKSPPPSLTSDWIV 129
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 91 WHLPDLKSHSITTPSS 44
W LPD +SHS +P S
Sbjct: 429 WMLPDKRSHSYGSPKS 444
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 24.6 bits (51), Expect = 6.7
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = -1
Query: 262 WSGISNTVTASKDRRCHNASLGPPPQTIQSSVKEAEPIHFPISGRLTLLSVW 107
W + V +DR + P+T+ + EA+ ++F G T+L ++
Sbjct: 1034 WCAV-RAVRTLRDRGVKTIMVNYNPETVSTDYDEADRLYFENIGLETVLDIY 1084
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 24.6 bits (51), Expect = 6.7
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLR 77
++TA +DG++ LWD +
Sbjct: 150 VLTASQDGLIKLWDYK 165
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 24.6 bits (51), Expect = 6.7
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRS-GKCHNKL 101
H L T G+D +WD+R+ GK L
Sbjct: 309 HPNGNILATGGQDTTAKVWDIRALGKSFRNL 339
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 24.6 bits (51), Expect = 6.7
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGK 86
L+++G+DG M+W++ +G+
Sbjct: 276 LLSSGKDGRAMVWNVETGE 294
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 24.6 bits (51), Expect = 6.7
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 217 CHNASLGPPPQTIQSSVKEAEPI 149
C ++ LG P +TIQ ++ +P+
Sbjct: 206 CRHSKLGEPSKTIQEVIEALKPL 228
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 24.2 bits (50), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 149 PFSNIWPANFTISVGFQLIVAFTRSQIP 66
PF +I+P NFT+ V F I S P
Sbjct: 130 PFVDIYPINFTLHVLFDPINGENTSYSP 157
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1073
Score = 24.2 bits (50), Expect = 8.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 190 PQTIQSSVKEAEPIHFPISGRLTLLSVWGSNLLWHLPDLKSHS 62
P +I K ++ IS TLL+V+ + L +PD K +S
Sbjct: 612 PHSISYLRKSNRAVYVLISSNSTLLTVYVTLTLEGVPDFKVYS 654
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGK 86
SKN L+T+ D V LW +S K
Sbjct: 264 SKNDFLLTSSADRTVRLWHPKSTK 287
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 232 SKDRRCHNASLGPPPQTIQSSVKEAEPIHFPIS 134
SKD++C N G P I E + F I+
Sbjct: 280 SKDKKCWNLEFGLTPVEILGHKGNVENVRFQIT 312
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 24.2 bits (50), Expect = 8.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSG 83
++T +DG V WD+++G
Sbjct: 238 MVTGSDDGSVHCWDVKTG 255
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 9 VHSKNQQLITAGEDGVVMLWDLRS 80
V S N + T G DG V WD ++
Sbjct: 289 VSSANPIIYTGGNDGSVRSWDYKT 312
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHT 113
++T +D + +WDLR + K+ T
Sbjct: 391 VVTTNDDSDIFIWDLRKSELVQKIPLQT 418
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,910,174
Number of Sequences: 5004
Number of extensions: 38839
Number of successful extensions: 249
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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