Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K06
(439 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 36 0.013
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 35 0.030
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 33 0.091
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 32 0.21
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 32 0.21
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 31 0.28
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 31 0.28
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 31 0.37
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 30 0.64
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 30 0.64
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 30 0.64
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 30 0.64
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 30 0.64
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 30 0.85
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 30 0.85
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 30 0.85
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 29 1.5
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 29 2.0
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 2.6
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 2.6
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 28 2.6
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 28 2.6
Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 27 4.5
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 4.5
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 4.5
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 27 4.5
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 27 7.9
AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine re... 27 7.9
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 27 7.9
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 27 7.9
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.013
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ ++ + L++AG D V +WD+ +G C + HTD
Sbjct: 86 KFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTD 122
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 34.7 bits (76), Expect = 0.030
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKL 101
S NQ LIT D VV +WD+ +GKC +++
Sbjct: 1005 SNNQFLITGSGDFVVQMWDVTNGKCISRM 1033
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.091
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ L++ G D V +WD+ +G C + HTD
Sbjct: 93 SSSLVSCGTDKSVRVWDMETGTCARRFRTHTD 124
Score = 30.3 bits (65), Expect = 0.64
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSASL 167
+ + Q+I+ G D V+ +WD+R + L H D + +S GK+I S S+
Sbjct: 174 NDSSDQVISGGIDNVLKVWDMRRDEITYTLTGHRDTITGISLSPSGKFIISNSM 227
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 32.7 bits (71), Expect = 0.12
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ QLI+A G++ +W +++ C ++ HTD
Sbjct: 577 DSQLISADSAGIIKIWTIKTADCECSIDAHTD 608
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 31.9 bits (69), Expect = 0.21
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSASLTDDW 179
R N +++ G D VV + ++SGKC ++ H+ + V D G I
Sbjct: 314 RFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHI--------- 364
Query: 180 IVCGGGPRLALWHLRSLDAVTVFDI 254
I C + +WH +S + ++ F +
Sbjct: 365 ISCSTDGSIRVWHGKSGECLSTFRV 389
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGG-GPRL 206
L++ +DG + +W+ +GK L+ + D S S + + G ++
Sbjct: 229 LVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKI 288
Query: 207 ALWHLRSLDAVTVFD-IPDHGI-HVSFFHDDCIIAGGTAKHLYQL 335
+W + + D + FD G+ V F D+ I G H+ ++
Sbjct: 289 KVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRV 333
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 31.9 bits (69), Expect = 0.21
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 RVHSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSASLTDDW 179
R N +++ G D VV + ++SGKC ++ H+ + V D G I
Sbjct: 314 RFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHI--------- 364
Query: 180 IVCGGGPRLALWHLRSLDAVTVFDI 254
I C + +WH +S + ++ F +
Sbjct: 365 ISCSTDGSIRVWHGKSGECLSTFRV 389
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGG-GPRL 206
L++ +DG + +W+ +GK L+ + D S S + + G ++
Sbjct: 229 LVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKI 288
Query: 207 ALWHLRSLDAVTVFD-IPDHGI-HVSFFHDDCIIAGGTAKHLYQL 335
+W + + D + FD G+ V F D+ I G H+ ++
Sbjct: 289 KVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRV 333
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.28
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 33 ITAGEDGVVMLWDLRSGKCHNKLEPH 110
I+AG D ++WD+RSG+C E H
Sbjct: 216 ISAGADKHSLVWDIRSGQCVQSFEGH 241
Score = 30.3 bits (65), Expect = 0.64
Identities = 21/86 (24%), Positives = 34/86 (39%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLA 209
++T D +WD+ SG+ HT V D+ K + +I G
Sbjct: 171 ILTGSGDSTCAIWDVESGQLIQNFHGHT-GDVFAIDVPK----CDTGNTFISAGADKHSL 225
Query: 210 LWHLRSLDAVTVFDIPDHGIHVSFFH 287
+W +RS V F+ + I+ FH
Sbjct: 226 VWDIRSGQCVQSFEGHEADINTVRFH 251
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.28
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 33 ITAGEDGVVMLWDLRSGKCHNKLEPH 110
I+AG D ++WD+RSG+C E H
Sbjct: 216 ISAGADKHSLVWDIRSGQCVQSFEGH 241
Score = 30.3 bits (65), Expect = 0.64
Identities = 21/86 (24%), Positives = 34/86 (39%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLA 209
++T D +WD+ SG+ HT V D+ K + +I G
Sbjct: 171 ILTGSGDSTCAIWDVESGQLIQNFHGHT-GDVFAIDVPK----CDTGNTFISAGADKHSL 225
Query: 210 LWHLRSLDAVTVFDIPDHGIHVSFFH 287
+W +RS V F+ + I+ FH
Sbjct: 226 VWDIRSGQCVQSFEGHEADINTVRFH 251
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.1 bits (67), Expect = 0.37
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
S + Q+ITA D V LWDL +G+ L H S
Sbjct: 320 SVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKS 354
Score = 26.6 bits (56), Expect = 7.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLE 104
+++ ++G + WD RSG C K++
Sbjct: 407 VVSGADNGSLCFWDWRSGFCFQKIQ 431
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.1 bits (67), Expect = 0.37
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
S + Q+ITA D V LWDL +G+ L H S
Sbjct: 320 SVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKS 354
Score = 26.6 bits (56), Expect = 7.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLE 104
+++ ++G + WD RSG C K++
Sbjct: 407 VVSGADNGSLCFWDWRSGFCFQKIQ 431
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.48
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHT 113
H +T G D +WD+R+G+C L+ HT
Sbjct: 347 HPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHT 380
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSASLTDDW 179
+++ DG V+LW L +LE H SKV+ G + +A W
Sbjct: 269 VVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTW 320
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 27 QLITAGEDGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSAS 164
++IT D + +WDLR + + HT ++V G+++ SAS
Sbjct: 394 EMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSAS 441
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 30.3 bits (65), Expect = 0.64
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPH 110
H K + LI+ +D + +W+L + +C +E H
Sbjct: 341 HPKGKYLISVADDKTLRVWELSAQRCMKAIEAH 373
Score = 28.7 bits (61), Expect = 2.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
+ + ED + +WD +G+ L+ HTD+
Sbjct: 121 MASCSEDATIKVWDYETGQLERTLKGHTDA 150
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.3 bits (65), Expect = 0.64
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSASL 167
+ T EDG V +W+ RS C + HT + V G+ I SASL
Sbjct: 375 MATGAEDGKVKIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASL 422
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 30.3 bits (65), Expect = 0.64
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 18 KNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ + +++ D + LWD+ SG C LE H +
Sbjct: 394 RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEE 426
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
N+ +I+ D V +WD+ +G+C L H ++
Sbjct: 272 NRVIISGSSDATVRVWDVETGECIKTLIHHCEA 304
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 30.3 bits (65), Expect = 0.64
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 18 KNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ + +++ D + LWD+ SG C LE H +
Sbjct: 394 RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEE 426
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
N+ +I+ D V +WD+ +G+C L H ++
Sbjct: 272 NRVIISGSSDATVRVWDVETGECIKTLIHHCEA 304
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 30.3 bits (65), Expect = 0.64
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPH 110
H K + LI+ +D + +W+L + +C +E H
Sbjct: 341 HPKGKYLISVADDKTLRVWELSAQRCMKAIEAH 373
Score = 28.7 bits (61), Expect = 2.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
+ + ED + +WD +G+ L+ HTD+
Sbjct: 121 MASCSEDATIKVWDYETGQLERTLKGHTDA 150
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 29.9 bits (64), Expect = 0.85
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
S + L++A D + LW L +GKC + PH + +V+
Sbjct: 49 SPHALLVSASYDLTIRLWQLSTGKCIGTI-PHNEGQVN 85
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 29.9 bits (64), Expect = 0.85
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -1
Query: 274 TWMPWSGISNTVTASKDRR---CHNASLGPPPQT 182
+WM W+G N+ S +RR C N L P P T
Sbjct: 402 SWMSWTGCGNSCGKSIERRSRICQNGLLCPGPAT 435
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 29.9 bits (64), Expect = 0.85
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -1
Query: 274 TWMPWSGISNTVTASKDRR---CHNASLGPPPQT 182
+WM W+G N+ S +RR C N L P P T
Sbjct: 402 SWMSWTGCGNSCGKSIERRSRICQNGLLCPGPAT 435
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGKCHNKLEPHTDS 119
T G+DGV++LWD+ + + +L H +S
Sbjct: 120 TGGKDGVIVLWDILAERGMFRLHGHKES 147
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 33 ITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS 128
+T D V +W L G CH H D+ S
Sbjct: 602 VTGSVDKSVKVWGLDFGDCHKSFHAHDDAVTS 633
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 29.1 bits (62), Expect = 1.5
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVS---RPDIGKWIGSASLTDDWIV 185
S ++ +++ +D +V ++D+ SG+C L+ HT+ P G I S S +
Sbjct: 158 SDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPS-GTLIASGSFDE---- 212
Query: 186 CGGGPRLALWHLRSLDAVTVFDIPDHGIHVS---FFHDDCIIAGGT 314
+ +W R + T+F IP H VS F D +A G+
Sbjct: 213 -----TIRIWCAR--NGNTIFSIPGHEDPVSSVCFNRDGAYLASGS 251
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 30 LITAGE-DGVVMLWDLRSGKCHNKLEPHTD--SKVSRPDIGKWIGSAS 164
L+ +G D V +WD+++G C L H+D S VS G I S S
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGS 232
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 15 SKNQQLITAGE-DGVVMLWDLRSGKC 89
+++ LI +G DG+V +WD +G+C
Sbjct: 222 NRDGSLIASGSYDGLVRIWDTANGQC 247
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 29.1 bits (62), Expect = 1.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKC 89
N + ++A DG V LW+++ G+C
Sbjct: 85 NTRFVSASADGRVCLWEIQDGRC 107
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
protein ZK970.6 protein.
Length = 1122
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 54 VVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLALWHLRSLD 233
+V+LW L + +C ++ P + + R I + S + W CGG +A+ +L+S
Sbjct: 8 MVLLWVLGASEC--QVIP-SSRRTLRVGIAAAQDTQSGSIGWASCGGTLPIAVQYLKSKG 64
Query: 234 AVTVFDI 254
+T FD+
Sbjct: 65 FLTDFDV 71
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 28.7 bits (61), Expect = 2.0
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRS 80
L+T+G++ V+M+WD+RS
Sbjct: 390 LVTSGQNRVIMIWDVRS 406
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 28.7 bits (61), Expect = 2.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 18 KNQQLITAGEDGVVMLWDLRSGKC 89
+ + L + GEDG V +W + +G+C
Sbjct: 356 RGELLASGGEDGTVRIWMIATGRC 379
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGK 86
HS N +L++A D V LW+ +G+
Sbjct: 475 HSSNSRLVSASSDSTVRLWEPGNGE 499
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGK 86
H L TA EDG++ LW+L K
Sbjct: 368 HPVEPVLFTASEDGLIKLWNLDQKK 392
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGK 86
HS N +L++A D V LW+ +G+
Sbjct: 475 HSSNSRLVSASSDSTVRLWEPGNGE 499
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGK 86
H L TA EDG++ LW+L K
Sbjct: 368 HPVEPVLFTASEDGLIKLWNLDQKK 392
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 3 TRVH-SKNQQL-ITAGEDGVVMLWDLRSGKC 89
T VH S+N +L +TA +DG V +WD S +C
Sbjct: 263 TDVHYSENARLYVTASKDGHVKIWDGVSNRC 293
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 15 SKN-QQLITAGEDGVVMLWDLRSGKC 89
+KN + ++T+G D +V LW+L + +C
Sbjct: 312 TKNGKYILTSGMDSIVKLWELSTNRC 337
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRS-GKCHNKLEPH 110
+ T G+DG V +WD RS L PH
Sbjct: 224 IATCGDDGYVRIWDTRSTSSALTSLHPH 251
>Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical
protein C31C9.8 protein.
Length = 390
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRS 80
L+T+G + V+M+WD+RS
Sbjct: 365 LVTSGHNRVIMIWDVRS 381
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
+ +AG D V +WD ++G C + H+D
Sbjct: 312 IASAGFDETVRVWDFKTGLCVKCIPAHSD 340
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 15 SKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
S +Q + +A +D V ++D+ SG C + HT+
Sbjct: 265 SNSQFIASASDDTTVKIFDVISGACLRTMRGHTN 298
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRSGK 86
+ G+DG MLWDL GK
Sbjct: 215 SGGKDGQAMLWDLNEGK 231
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
protein R134.1 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 126 SRPDIGKWIGSASLTDD----WIVCGGGPRLALWHLRSLDAVTVFD 251
+RP + I +A T W VCGG LA+ L+ VT FD
Sbjct: 31 TRPKLKVGIAAAQKTQSASIGWNVCGGAVPLAIERLKQAGYVTNFD 76
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
N L+TAG + V+ +W++ +G+ ++ H D
Sbjct: 142 NNVLLTAGGENVMFMWNVGTGEALLEISGHPD 173
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
N L+TAG + V+ +W++ +G+ ++ H D
Sbjct: 142 NNVLLTAGGENVMFMWNVGTGEALLEISGHPD 173
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
N L+TAG + V+ +W++ +G+ ++ H D
Sbjct: 142 NNVLLTAGGENVMFMWNVGTGEALLEISGHPD 173
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 21 NQQLITAGEDGVVMLWDLRSGKCHNKLEPHTD 116
N L+TAG + V+ +W++ +G+ ++ H D
Sbjct: 142 NNVLLTAGGENVMFMWNVGTGEALLEISGHPD 173
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 27.5 bits (58), Expect = 4.5
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGK 86
+++ L+TAG+DG++ WD+ + +
Sbjct: 181 NTREGHLLTAGDDGMICHWDINANQ 205
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTD 173
L++ D V +WD+ G C + L H + S G+ + + S D
Sbjct: 474 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDD 521
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTD 173
L++ D V +WD+ G C + L H + S G+ + + S D
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDD 523
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 24 QQLITAGEDGVVMLWDLRSGKCHNKLEPH 110
QQ++TA D +WD+ G+ N L H
Sbjct: 293 QQMVTASWDRTANVWDVEKGEVVNILSGH 321
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 24 QQLITAGEDGVVMLWDLRSGKCHNKLEPH 110
QQ++TA D +WD+ G+ N L H
Sbjct: 291 QQMVTASWDRTANVWDVEKGEVVNILSGH 319
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTD 173
L++ D V +WD+ G C + L H + S G+ + + S D
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDD 523
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGK 86
L T EDG V LWDLR K
Sbjct: 395 LATGSEDGEVKLWDLRKLK 413
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 26.6 bits (56), Expect = 7.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 36 TAGEDGVVMLWDLRS 80
T G DG+V LWDL++
Sbjct: 349 TCGTDGIVALWDLKN 363
>AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine
receptor, class t protein62 protein.
Length = 322
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 264 GIHVS-FFHDDCIIAGGTAKHLYQLS--YSGEVKVELPVSPTTVYSAVLRTSPNN 419
GI VS FF+ II K Y +S Y+ EVK+ + + TVY VL +N
Sbjct: 192 GIFVSAFFYILIIIRLLNTKKKYLISKNYNAEVKILIQATVITVYCTVLNVLWHN 246
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/87 (21%), Positives = 34/87 (39%)
Frame = +3
Query: 30 LITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPRLA 209
++TA G + +WD LE + + + + I + D V G
Sbjct: 508 IVTASTSGTISVWDYTEKDVREDLERSRNWQEAEI---RSISNIQ-ADGKFVSAHGQHAV 563
Query: 210 LWHLRSLDAVTVFDIPDHGIHVSFFHD 290
LW+++++ + V D I V F D
Sbjct: 564 LWNVKNMKIIDVLSCSDDIISVDFAAD 590
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 26.6 bits (56), Expect = 7.9
Identities = 23/121 (19%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +3
Query: 12 HSKNQQLITAGEDGVVMLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCG 191
H ++ G+D + +W+ + +C L H D + K+ S +DD V
Sbjct: 62 HHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTV-- 119
Query: 192 GGPRLALWHLRSLDAVTVFDIPDHGIHVSFFH--DDCIIAGGTAKHLYQLSYSGEVKVEL 365
+W+ +S +++ + +H + + FH +D + + + + SG K ++
Sbjct: 120 -----RIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQM 174
Query: 366 P 368
P
Sbjct: 175 P 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,702,640
Number of Sequences: 27780
Number of extensions: 219167
Number of successful extensions: 805
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -