Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K05
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81522-6|CAB04230.1|  277|Caenorhabditis elegans Hypothetical pr...    30   1.0  
U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas...    28   4.1  
U41012-4|AAA82296.2|  413|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U41273-2|AAA82454.2|  306|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z81522-6|CAB04230.1|  277|Caenorhabditis elegans Hypothetical
           protein F32B4.5 protein.
          Length = 277

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/42 (30%), Positives = 27/42 (64%)
 Frame = +2

Query: 32  ICFFLPYYK*LHNIRYKPINFCFLLV*YSGVHEFVIFLILNG 157
           + FF P++     +R+ PINF  LL+  + + E+V+ ++++G
Sbjct: 205 LSFFFPFFC-SFLLRFSPINFPLLLLMNTAIGEYVLRIVVSG 245


>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
           protein 15 protein.
          Length = 1000

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 197 KQVFTSKNRLNRSNRLE*EKLRTHVHRNII 108
           K+++ S     RSNRLE  KL+  V+ N+I
Sbjct: 461 KRIYRSDVEFTRSNRLEIAKLQESVNSNVI 490


>U41012-4|AAA82296.2|  413|Caenorhabditis elegans Hypothetical
           protein C06A6.5 protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -2

Query: 250 RNVLSLFRFVDFQIATMLNKFSLQ 179
           R+V +L  FV FQ++T +N+FS Q
Sbjct: 122 RSVEALTNFVKFQLSTAINEFSSQ 145


>U41273-2|AAA82454.2|  306|Caenorhabditis elegans Hypothetical
           protein C26B9.6 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 377 VCIIRFLKVSLLPRV-NCTHYFFYTLLWSSF 466
           +C I + K+++  R+ NC H F Y  L S+F
Sbjct: 106 ICYICYYKLTIPTRIENCGHEFCYVCLKSNF 136


>AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical
           protein F15E6.9 protein.
          Length = 664

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 487 PIRWYYILHKCEH 525
           P+RWY++LH+  H
Sbjct: 590 PLRWYFVLHRLGH 602


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,150,385
Number of Sequences: 27780
Number of extensions: 236333
Number of successful extensions: 424
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)