Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K05
(569 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 27 0.13
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 27 0.17
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 24 1.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 6.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 6.5
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 8.6
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 8.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.6
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 27.1 bits (57), Expect = 0.13
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 478 SLELKRRPQKCIKKIMRAIHTWEK*NLQKTYNTYVKKLPYLNRTSNLTVVP 326
S + K R + KI+ ++ K + YN Y KKL Y N N+ +P
Sbjct: 67 SRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQIP 117
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 26.6 bits (56), Expect = 0.17
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 472 ELKRRPQKCIKKIMRAIHTWEK*NLQKTYNTYVKKLPYLNRTSNLTVVP 326
E +R ++ I + + + N + YN Y KKL Y N N+ +P
Sbjct: 305 ERERSKERKIISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINIEQIP 353
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 280 LRAWLARSTNQRVS*TVRL 336
LR W +++ NQ V+ TVR+
Sbjct: 187 LRNWFSKNVNQTVAETVRI 205
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 388 YNTYVKKLPYLNRTSNLTVVP 326
YN Y KKL Y N N+ +P
Sbjct: 338 YNNYNKKLYYKNYIINIEQIP 358
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 100 NYNNNYNTNYKKLQYYN-IINIEQIP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 403 NLQKTYNTYVKKLPYLNRTSNLTVVP 326
N YNT KKL Y N N+ +P
Sbjct: 96 NYNNNYNTNYKKLQYYN-IINIEQIP 120
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 36 VFFCLIINDSIIYAINQ*TFVSC*YNIPVY 125
V+ + N S++Y+I +SC N+ +Y
Sbjct: 138 VYIRIFPNGSVLYSIRISLTLSCPMNLKLY 167
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 36 VFFCLIINDSIIYAINQ*TFVSC*YNIPVY 125
V+ + N S++Y+I +SC N+ +Y
Sbjct: 138 VYIRIFPNGSVLYSIRISLTLSCPMNLKLY 167
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 73 YIMESFIIRQKKTNLLQ 23
YI+ F+I Q+KT+ L+
Sbjct: 76 YIIRMFLISQQKTSKLK 92
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 73 YIMESFIIRQKKTNLLQ 23
YI+ F+I Q+KT+ L+
Sbjct: 59 YIIRMFLISQQKTSKLK 75
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 385 NTYVKKLPYLNRTSNLTVVP 326
N Y KKL Y N N+ +P
Sbjct: 109 NNYNKKLYYKNYIINIEQIP 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,789
Number of Sequences: 438
Number of extensions: 3293
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -