Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_K03
         (394 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   0.95 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   2.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   8.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +3

Query: 21  RLERSSYKNVLRFFLEYVIVFLLCY 95
           R + ++ +NV+R  +  V+ F +C+
Sbjct: 274 RRKSAAQRNVIRMLVAVVVAFFICW 298


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +3

Query: 36  SYKNVLRFFLEYVIVFLLCYIRVSVCWYTKFTI*GIYRVARNSFFFPLIDQICYKRTISL 215
           S K+V++     VI+F        +CW    T   +Y  A+ S ++P +++  Y  +  L
Sbjct: 264 SRKSVIKMLSAVVILFF-------ICWAPFHTQRLLYVYAQESDYYPDLNEWLYILSGCL 316

Query: 216 Y 218
           Y
Sbjct: 317 Y 317


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 155 GNPIYPLNSKLSIPTN 108
           GNPI PLN   S+ ++
Sbjct: 424 GNPISPLNDWYSLASS 439


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 164 FFFSPHRSNLLQAYDKPLYG 223
           FF S    +  ++Y+ PLYG
Sbjct: 622 FFLSSMDESNTKSYEIPLYG 641


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 39  YKNVLRFFLEY 71
           Y+N+L +FL Y
Sbjct: 424 YQNILSYFLRY 434



 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 164 FFFSPHRSNLLQAYDKPLYG 223
           FF S    +  ++Y+ PLYG
Sbjct: 622 FFLSSMDESNTKSYEIPLYG 641


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,069
Number of Sequences: 438
Number of extensions: 2298
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)